RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA986481", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA986481 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9901596 9901596 PRJNA986481_P_NODE_26468_length_319_cov_1.733333_g25943_i0 PRJNA986481 26468 319 1.733333 5.52933227 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 161 4.76e-35   NTclustered gi|2874253689|emb|OY969415.1| 157466 g25943 i0 84.524 16.7398119122257 168 21 52 5 145 310 3914811 3914975 MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 blastn 5340 161 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
26804825 26804825 PRJNA986481_P_NODE_61301_length_235_cov_9.112903_g60776_i0 PRJNA986481 61301 235 9.112903 21.41532205 Armatimonadota bacterium 2033014 Bacteria Bacteria 44.7 0.00716   NR MBS1707221.1 2033014 g60776 i0 42.6 0.68936170212766 54 24 60 2 1 141 669 722 MBS1707221.1 penicillin acylase family protein [Armatimonadota bacterium] diamond 162 44.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27879279 27879279 PRJNA986481_P_NODE_28505_length_307_cov_1.864341_g27980_i0 PRJNA986481 28505 307 1.864341 5.72352687 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 66.6 6.31e-11   NR MBL8065062.1 2739509 g27980 i0 45.5 0.859934853420195 88 33 84 3 260 3 18 92 MBL8065062.1 GTP-binding protein [Chthonomonadaceae bacterium] diamond 264 66.6 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
31258714 31258714 PRJNA986481_P_NODE_50255_length_252_cov_0.995074_g49730_i0 PRJNA986481 50255 252 0.995074 2.50758648 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.1 0.00636   NR MFO7947904.1 2033014 g49730 i0 32.9 0.94047619047619 79 51 91.7 1 6 236 60 138 MFO7947904.1 DUF4838 domain-containing protein [Armatimonadota bacterium] diamond 237 45.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;