RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA986481", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA986481 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27690232 27690232 PRJNA986481_P_NODE_51804_length_250_cov_1.004975_g51279_i0 PRJNA986481 51804 250 1.004975 2.5124375 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 46.2 0.00234   NR HRZ39496.1 2035772 g51279 i0 54.1 0.444 37 17 44.4 0 245 135 41 77 HRZ39496.1 ankyrin repeat domain-containing protein [Candidatus Omnitrophota bacterium] diamond 111 46.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30563196 30563196 PRJNA986481_P_NODE_29433_length_302_cov_1.395257_g28908_i0 PRJNA986481 29433 302 1.395257 4.21367614 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 95.9 8.6e-22   NR MCD4781063.1 2035772 g28908 i0 60 2.08609271523179 70 25 69.5 1 301 92 176 242 MCD4781063.1 SDR family oxidoreductase [Candidatus Omnitrophota bacterium] diamond 630 95.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;