contig_metadata
6 rows where bioproject = "PRJNA986481", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 973182 | 973182 | PRJNA986481_P_NODE_13161_length_451_cov_5.009950_g12637_i0 | PRJNA986481 | 13161 | 451 | 5.00995 | 22.5948745 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 54.7 | 0.012 | NTclustered | gi|2806465713|ref|XM_068506234.1| | 1144522 | g12637 | i0 | 100 | 0.906873614190687 | 29 | 0 | 6 | 0 | 365 | 393 | 1736 | 1764 | Tritrichomonas foetus Dynein heavy chain family protein (TRFO_28537), partial mRNA | blastn | 409 | 54.7 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus | |||
| 973943 | 973943 | PRJNA986481_P_NODE_57981_length_243_cov_1.768041_g57456_i0 | PRJNA986481 | 57981 | 243 | 1.768041 | 4.29633963 | root | 1 | Root_unresolved | Root_unresolved | 84 | 8.86e-17 | NR | XP_001304373.1 | 412133 | g57456 | i0 | 58.1 | 3.02469135802469 | 62 | 26 | 76.5 | 0 | 1 | 186 | 341 | 402 | XP_001304373.1 ATP-dependent RNA helicase DBP3 family [Trichomonas vaginalis G3] | diamond | 735 | 84.7 | 0.991735537190083 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 4801404 | 4801404 | PRJNA986481_P_NODE_31284_length_292_cov_1.901235_g30759_i0 | PRJNA986481 | 31284 | 292 | 1.901235 | 5.5516062 | Trichomonas vaginalis | 5722 | Parabasalia | other_Eukaryota | 65.8 | 3.48e-6 | NTclustered | gi|2319615616|ref|XR_007835995.1| | 412133 | g30759 | i0 | 90.385 | 0.797945205479452 | 52 | 2 | 17 | 3 | 128 | 178 | 2561 | 2610 | Trichomonas vaginalis G3 23S ribosomal RNA (TVAGG3_0034210), rRNA | blastn | 233 | 65.8 | 1 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 26741078 | 26741078 | PRJNA986481_P_NODE_10821_length_498_cov_1.327394_g10299_i0 | PRJNA986481 | 10821 | 498 | 1.327394 | 6.61042212 | Trichomonas vaginalis G3 | 412133 | Parabasalia | other_Eukaryota | 46.6 | 0.00852 | NR | XP_001317644.1 | 412133 | g10299 | i0 | 44.2 | 0.590361445783133 | 52 | 28 | 31.3 | 1 | 496 | 341 | 14 | 64 | XP_001317644.1 ribonuclease inhibitor domain-containing protein [Trichomonas vaginalis G3] | diamond | 294 | 46.6 | 1 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 31037781 | 31037781 | PRJNA986481_P_NODE_32375_length_287_cov_1.802521_g31850_i0 | PRJNA986481 | 32375 | 287 | 1.802521 | 5.17323527 | Histomonas meleagridis | 135588 | Parabasalia | other_Eukaryota | 104 | 3.85e-25 | NR | XP_067773722.1 | 135588 | g31850 | i0 | 49.5 | 1.98606271777003 | 95 | 44 | 99.3 | 1 | 1 | 285 | 79 | 169 | XP_067773722.1 Ubiquitin-conjugating enzyme family protein [Histomonas meleagridis] | diamond | 570 | 104 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Dientamoebidae | Histomonas | Histomonas meleagridis | |||
| 31733017 | 31733017 | PRJNA986481_P_NODE_43737_length_259_cov_1.442857_g43212_i0 | PRJNA986481 | 43737 | 259 | 1.442857 | 3.73699963 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 74.7 | 2.38e-13 | NR | XP_068369368.1 | 1144522 | g43212 | i0 | 47.4 | 0.88030888030888 | 76 | 38 | 88 | 1 | 3 | 230 | 198 | 271 | XP_068369368.1 CAMK family protein kinase [Tritrichomonas foetus] | diamond | 228 | 74.7 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;