RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA986481", tax_clade = "FCB group" and tax_phylum = "Chlorobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA986481 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7350979 7350979 PRJNA986481_P_NODE_11826_length_476_cov_2.637002_g11302_i0 PRJNA986481 11826 476 2.637002 12.55212952 Chlorobaculum limnaeum 274537 Bacteria Bacteria 254 1.18e-62   NTclustered gi|1070918267|gb|CP017305.1| 274537 g11302 i0 77.483 343.981092436975 453 82 93 18 27 467 72188 72632 Chlorobaculum limnaeum strain DSM 1677 chromosome, complete genome blastn 163735 254 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae Chlorobaculum Chlorobaculum limnaeum
32366090 32366090 PRJNA986481_P_NODE_15699_length_414_cov_2.898630_g15174_i0 PRJNA986481 15699 414 2.89863 12.0003282 Chlorobiota bacterium 2268192 Bacteria Bacteria 48.5 0.00217   NR MCK5740947.1 2268192 g15174 i0 35.3 0.492753623188406 68 35 48.6 2 39 239 142 201 MCK5740947.1 T9SS type A sorting domain-containing protein [Chlorobiota bacterium] diamond 204 48.5 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;