RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA986481", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 1 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 1 ✖

bioproject 1

  • PRJNA986481 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15001324 15001324 PRJNA986481_P_NODE_24032_length_334_cov_3.747368_g23507_i0 PRJNA986481 24032 334 3.747368 12.51620912 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 52.8 0.031   NTclustered gi|2621703325|emb|OY762463.1| 3060593 g23507 i0 100 0.0838323353293413 28 0 8 0 273 300 1635261 1635234 MAG: Candidatus Cloacimonadales bacterium isolate 65c66405-a38e-4cb1-a3a4-7640fae4a1c6 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;