RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA986481", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA986481 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25498693 25498693 PRJNA986481_P_NODE_8420_length_561_cov_2.158203_g7911_i0 PRJNA986481 8420 561 2.158203 12.10751883 Minisyncoccota bacterium 2053589 Bacteria Bacteria 141 1.03e-39   NR MDR3570671.1 2053589 g7911 i0 72.1 0.593582887700535 111 27 57.2 2 66 386 1 111 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 333 141 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28542561 28542561 PRJNA986481_P_NODE_44127_length_259_cov_0.961905_g43602_i0 PRJNA986481 44127 259 0.961905 2.49133395 Minisyncoccota bacterium 2053589 Bacteria Bacteria 51.6 1.09e-5   NR MDR3571614.1 2053589 g43602 i0 46.4 1.98069498069498 56 30 64.9 0 170 3 45 100 MDR3571614.1 8-oxo-dGTP diphosphatase [Candidatus Paceibacterota bacterium] diamond 513 51.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;