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contig_metadata

20 rows where bioproject = "PRJNA983848" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA983848 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2547232 2547232 PRJNA983848_P_NODE_55222_length_451_cov_3.878307_g49343_i0 PRJNA983848 55222 451 3.878307 17.49116457 Verrucomicrobiota 74201 Bacteria Bacteria 388 2.93e-103   NTclustered gi|2874254065|emb|OY970130.1| 412056 g49343 i0 83.765 2.81152993348115 425 54 92 13 1 413 1683841 1683420 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 blastn 1268 388 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
8623314 8623314 PRJNA983848_P_NODE_68027_length_385_cov_4.695513_g62144_i0 PRJNA983848 68027 385 4.695513 18.07772505 Horticoccus luteus 2862869 Bacteria Bacteria 235 3.3999999999999996e-57   NTclustered gi|2077391884|gb|CP080507.1| 2862869 g62144 i0 82.131 3.64935064935065 291 37 74 11 28 311 2448360 2448642 Horticoccus luteus strain KSB-15 chromosome, complete genome blastn 1405 235 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Horticoccus Horticoccus luteus
9899558 9899558 PRJNA983848_P_NODE_96288_length_309_cov_4.470339_g90405_i0 PRJNA983848 96288 309 4.470339 13.81334751 Luteolibacter sp. 1962973 Bacteria Bacteria 409 1.4899999999999998e-109   NTclustered gi|2836248208|gb|CP121322.1| 1962973 g90405 i0 90.615 283.313915857605 309 28 100 1 1 309 1010648 1010955 MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome blastn 87544 409 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
11171837 11171837 PRJNA983848_P_NODE_167269_length_207_cov_6.641791_g161386_i0 PRJNA983848 167269 207 6.6417909999999996 13.74850737 Luteolibacter sp. 1962973 Bacteria Bacteria 209 1.02e-49   NTclustered gi|2836248208|gb|CP121322.1| 1962973 g161386 i0 87.027 387.666666666667 185 24 89 0 18 202 1010122 1010306 MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome blastn 80247 209 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
12445648 12445648 PRJNA983848_P_NODE_110310_length_286_cov_2.201878_g104427_i0 PRJNA983848 110310 286 2.201878 6.29737108 Oceaniferula spumae 2979115 Bacteria Bacteria 339 1.8099999999999997e-88   NTclustered gi|2753272999|dbj|AP026866.1| 2979115 g104427 i0 88.194 289.038461538462 288 29 100 5 1 286 831118 831402 Verrucomicrobiaceae bacterium NT6N DNA, complete genome blastn 82665 339 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Oceaniferula Oceaniferula spumae
13721490 13721490 PRJNA983848_P_NODE_150951_length_246_cov_1.699422_g145068_i0 PRJNA983848 150951 246 1.699422 4.18057812 Sulfuriroseicoccus oceanibius 2707525 Bacteria Bacteria 202 2.08e-47   NTclustered gi|1953472588|gb|CP066776.1| 2707525 g145068 i0 85.864 158.642276422764 191 25 81 2 41 230 632567 632378 Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome blastn 39026 202 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Sulfuriroseicoccus Sulfuriroseicoccus oceanibius
14999271 14999271 PRJNA983848_P_NODE_95752_length_310_cov_3.928270_g89869_i0 PRJNA983848 95752 310 3.92827 12.177637 Roseibacillus persicicus 454148 Bacteria Bacteria 425 1.48e-114   NTclustered gi|2889362999|gb|CP151838.1| 454148 g89869 i0 92.079 277.387096774194 303 22 97 2 9 310 781229 780928 Roseibacillus persicicus strain AS69 chromosome, complete genome blastn 85990 425 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Roseibacillus Roseibacillus persicicus
15299401 15299401 PRJNA983848_P_NODE_16992_length_1451_cov_2.474601_g12995_i0 PRJNA983848 16992 1451 2.474601 35.90646051 Verrucomicrobiota 74201 Bacteria Bacteria 1463 0   NTclustered gi|183579829|emb|AM905426.1| 320771 g12995 i0 85.237 141.075809786354 1436 196 98 15 26 1451 1452 23 Bacterium Ellin514 23S rRNA gene, isolate Ellin514 blastn 204701 1463 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera parvula
17546362 17546362 PRJNA983848_P_NODE_167714_length_199_cov_5.666667_g161831_i0 PRJNA983848 167714 199 5.666667 11.27666733 uncultured Verrucomicrobiota bacterium 156588 Bacteria Bacteria 351 1.52e-92   NTclustered gi|511202471|gb|KC994702.1| 156588 g161831 i0 98.492 100.226130653266 199 3 100 0 1 199 1227 1425 Uncultured Verrucomicrobia bacterium clone BF 022 16S ribosomal RNA gene, partial sequence blastn 19945 351 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         uncultured Verrucomicrobiota bacterium
20097752 20097752 PRJNA983848_P_NODE_95216_length_311_cov_4.726891_g89333_i0 PRJNA983848 95216 311 4.726891 14.70063101 Horticoccus luteus 2862869 Bacteria Bacteria 222 2.09e-53   NTclustered gi|2077391884|gb|CP080507.1| 2862869 g89333 i0 79.936 1.0096463022508 314 54 99 7 1 309 221150 221459 Horticoccus luteus strain KSB-15 chromosome, complete genome blastn 314 222 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Horticoccus Horticoccus luteus
21371166 21371166 PRJNA983848_P_NODE_33097_length_729_cov_2.963415_g27409_i0 PRJNA983848 33097 729 2.963415 21.60329535 uncultured Verrucomicrobiota bacterium 156588 Bacteria Bacteria 1214 0   NTclustered gi|511202471|gb|KC994702.1| 156588 g27409 i0 96.712 98.4156378600823 730 22 100 2 1 729 31 759 Uncultured Verrucomicrobia bacterium clone BF 022 16S ribosomal RNA gene, partial sequence blastn 71745 1214 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         uncultured Verrucomicrobiota bacterium
23921435 23921435 PRJNA983848_P_NODE_29619_length_818_cov_32.923490_g24105_i0 PRJNA983848 29619 818 32.92349 269.3141482 Opitutus terrae 107709 Bacteria Bacteria 802 0   NTclustered gi|177839040|gb|CP001032.1| 452637 g24105 i0 84.643 6.01222493887531 827 104 99 18 2 818 4393741 4392928 Opitutus terrae PB90-1, complete genome blastn 4918 802 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
27531923 27531923 PRJNA983848_P_NODE_96923_length_308_cov_2.119149_g91040_i0 PRJNA983848 96923 308 2.119149 6.52697892 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 42.7 0.0212   NR HXT83479.1 2499141 g91040 i0 47.5 0.38961038961039 40 21 39 0 150 31 55 94 HXT83479.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 120 42.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28194778 28194778 PRJNA983848_P_NODE_155366_length_244_cov_1.309942_g149483_i0 PRJNA983848 155366 244 1.309942 3.19625848 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 47.8 6.2e-4   NR MEO0454925.1 2026799 g149483 i0 47.8 0.565573770491803 46 23 56.6 1 173 36 175 219 MEO0454925.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 138 47.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28289525 28289525 PRJNA983848_P_NODE_160106_length_242_cov_0.923077_g154223_i0 PRJNA983848 160106 242 0.923077 2.23384634 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 123 6.2e-33   NR NDF17446.1 2026799 g154223 i0 69.1 1.00413223140496 81 24 99.2 1 3 242 91 171 NDF17446.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 243 123 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28605430 28605430 PRJNA983848_P_NODE_60167_length_421_cov_1.979885_g54285_i0 PRJNA983848 60167 421 1.979885 8.33531585 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 45.1 0.0284   NR TMP98142.1 2026799 g54285 i0 51.3 0.27790973871734 39 18 27.8 1 114 230 183 220 TMP98142.1 MAG: prepilin-type N-terminal cleavage/methylation domain-containing protein [Verrucomicrobiota bacterium] diamond 117 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28763175 28763175 PRJNA983848_P_NODE_145067_length_249_cov_1.534091_g139184_i0 PRJNA983848 145067 249 1.534091 3.81988659 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 43.9 0.015   NR HTX58466.1 2499141 g139184 i0 54.1 0.44578313253012 37 14 41 1 63 164 311 347 HTX58466.1 DUF1565 domain-containing protein [Verrucomicrobiia bacterium] diamond 111 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29931764 29931764 PRJNA983848_P_NODE_159711_length_242_cov_0.923077_g153828_i0 PRJNA983848 159711 242 0.923077 2.23384634 Candidatus Didemnitutus sp. 2814259 Bacteria Bacteria 130 3.18e-33   NR HET7535355.1 2814259 g153828 i0 76.3 0.991735537190083 80 19 99.2 0 2 241 126 205 HET7535355.1 SulP family inorganic anion transporter [Candidatus Didemnitutus sp.] diamond 240 130 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Candidatus Didemnitutus Candidatus Didemnitutus sp.
30342830 30342830 PRJNA983848_P_NODE_143632_length_250_cov_0.881356_g137749_i0 PRJNA983848 143632 250 0.881356 2.20339 Opitutus terrae 107709 Bacteria Bacteria 58.2 1.53e-7   NR WP_012374816.1 107709 g137749 i0 49.3 0.804 67 34 80.4 0 222 22 718 784 WP_012374816.1 hypothetical protein [Opitutus terrae] diamond 201 58.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
31353558 31353558 PRJNA983848_P_NODE_114356_length_281_cov_1.307692_g108473_i0 PRJNA983848 114356 281 1.307692 3.67461452 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 46.2 0.00362   NR MBI4661175.1 2026799 g108473 i0 36.2 0.736654804270463 69 39 68.3 2 202 11 704 772 MBI4661175.1 TonB-dependent receptor [Verrucomicrobiota bacterium] diamond 207 46.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;