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contig_metadata

13 rows where bioproject = "PRJNA983848", tax_kingdom = "Viridiplantae" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 13 ✖

tax_kingdom 1

  • Viridiplantae · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA983848 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6069580 6069580 PRJNA983848_P_NODE_105705_length_293_cov_2.018182_g99822_i0 PRJNA983848 105705 293 2.018182 5.91327326 Coccomyxa subellipsoidea 248742 Plants Plants 58.4 5.84e-4   NTclustered gi|545359120|ref|XM_005644997.1| 574566 g99822 i0 97.059 0.453924914675768 34 1 12 0 167 200 1386 1353 Coccomyxa subellipsoidea C-169 carbonic anhydrase partial mRNA blastn 133 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
7649482 7649482 PRJNA983848_P_NODE_102426_length_298_cov_14.088889_g96543_i0 PRJNA983848 102426 298 14.088889 41.98488922 Eukaryota 2759 Plants Plants 544 3.7499999999999997e-150   NTclustered gi|1898545223|gb|MT951391.1| 3078 g96543 i0 99.663 99.6543624161074 297 1 99 0 1 297 587 883 Auxenochlorella pyrenoidosa strain Ozcimen001 small subunit ribosomal RNA gene, partial sequence blastn 29697 549 0.990892531876138 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
10200213 10200213 PRJNA983848_P_NODE_61128_length_416_cov_1.755102_g55246_i0 PRJNA983848 61128 416 1.755102 7.30122432 Trebouxiophyceae 75966 Plants Plants 63.9 1.85e-5   NTclustered gi|371782132|emb|HE610164.1| 33092 g55246 i0 95 15.6947115384615 40 2 10 0 363 402 37 76 Koliella longiseta plastid partial 23S rRNA gene, strain SAG 470-1 blastn 6529 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella longiseta
12446501 12446501 PRJNA983848_P_NODE_133870_length_257_cov_1.532609_g127987_i0 PRJNA983848 133870 257 1.532609 3.93880513 Chlamydomonas reinhardtii 3055 Plants Plants 263 9.92e-66   NTclustered gi|2082243702|ref|XM_043061450.1| 3055 g127987 i0 86.809 47.3540856031128 235 31 91 0 23 257 976 742 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g204250v5), mRNA blastn 12170 263 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12750775 12750775 PRJNA983848_P_NODE_164270_length_231_cov_4.259494_g158387_i0 PRJNA983848 164270 231 4.259494 9.83943114 Prototheca 3110 Plants Plants 412 8.22e-111   NTclustered gi|1158987632|gb|KX353637.1| 3112 g158387 i0 100 51.4372294372294 223 0 97 0 1 223 356 578 Prototheca zopfii strain HSH93851 28S ribosomal RNA gene, partial sequence blastn 11882 412 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca zopfii
19122814 19122814 PRJNA983848_P_NODE_105515_length_293_cov_3.363636_g99632_i0 PRJNA983848 105515 293 3.363636 9.85545348 Trebouxiophyceae 75966 Plants Plants 161 4.33e-35   NTclustered gi|1169296931|gb|KY364701.1| 63676 g99632 i0 88.148 9.82252559726962 135 16 46 0 156 290 5552 5418 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 2878 161 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
23919529 23919529 PRJNA983848_P_NODE_122619_length_270_cov_1.583756_g116736_i0 PRJNA983848 122619 270 1.583756 4.2761412 Nephroselmis astigmatica 259378 Plants Plants 97.1 1.13e-15   NTclustered gi|371782113|emb|HE610145.1| 259378 g116736 i0 85.87 6.22962962962963 92 11 34 2 180 270 3846 3756 Nephroselmis astigmatica 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain NIES N-252 blastn 1682 97.1 1 Eukaryota   Viridiplantae Chlorophyta Nephroselmidophyceae Nephroselmidales Nephroselmidaceae Nephroselmis Nephroselmis astigmatica
28131966 28131966 PRJNA983848_P_NODE_155785_length_244_cov_0.912281_g149902_i0 PRJNA983848 155785 244 0.912281 2.22596564 Trebouxia sp. C 2796353 Plants Plants 43.5 0.0198   NR KAL3158193.1 3373144 g149902 i0 31 0.713114754098361 58 40 71.3 0 20 193 320 377 KAL3158193.1 hypothetical protein ABBQ38_010449 [Trebouxia sp. C0009 RCD-2024] diamond 174 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0009 RCD-2024
28637230 28637230 PRJNA983848_P_NODE_56387_length_444_cov_1.051213_g50508_i0 PRJNA983848 56387 444 1.051213 4.66738572 Auxenochlorella protothecoides 3075 Plants Plants 112 4.12e-26   NR XP_011401591.1 3075 g50508 i0 44.4 2.77702702702703 144 76 95.3 3 3 425 250 392 XP_011401591.1 Peroxiredoxin-2 [Auxenochlorella protothecoides] diamond 1233 112 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
30468929 30468929 PRJNA983848_P_NODE_156273_length_244_cov_0.912281_g150390_i0 PRJNA983848 156273 244 0.912281 2.22596564 Cymbomonas tetramitiformis 36881 Plants Plants 53.1 8.11e-6   NR KAK3276030.1 36881 g150390 i0 42.4 0.811475409836066 66 33 81.1 2 202 5 115 175 KAK3276030.1 hypothetical protein CYMTET_15873 [Cymbomonas tetramitiformis] diamond 198 53.1 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
30500325 30500325 PRJNA983848_P_NODE_92453_length_317_cov_1.508197_g86570_i0 PRJNA983848 92453 317 1.508197 4.78098449 Picochlorum sp. BPE23 2696299 Plants Plants 122 1.96e-33   NR KAI8104783.1 2696299 g86570 i0 64.4 1.98738170347003 104 37 98.4 0 3 314 14 117 KAI8104783.1 hypothetical protein M9434_003335 [Picochlorum sp. BPE23] diamond 630 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
30727368 30727368 PRJNA983848_P_NODE_87954_length_327_cov_1.027559_g82071_i0 PRJNA983848 87954 327 1.0275589999999999 3.36011793 Eukaryota 2759 Plants Plants 95.9 7.550000000000001e-21   NR KAG2423772.1 51695 g82071 i0 74.6 3.03669724770642 59 15 54.1 0 322 146 245 303 KAG2423772.1 hypothetical protein HXX76_015048 [Chlamydomonas incerta] diamond 993 96.3 0.995846313603323 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
32017777 32017777 PRJNA983848_P_NODE_117958_length_276_cov_1.536946_g112075_i0 PRJNA983848 117958 276 1.536946 4.24197096 Trebouxia sp. C 2796353 Plants Plants 61.6 2.69e-9   NR KAL0051365.1 2905655 g112075 i0 65.1 1.82608695652174 43 15 46.7 0 275 147 134 176 KAL0051365.1 hypothetical protein WJX82_006297 [Trebouxia sp. C0006] diamond 504 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0006

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;