RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA983848", tax_kingdom = "Thermotogati" and tax_phylum = "Thermotogota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermotogota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA983848 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25197503 25197503 PRJNA983848_P_NODE_95700_length_311_cov_0.983193_g89817_i0 PRJNA983848 95700 311 0.983193 3.05773023 Tepiditoga spiralis 2108365 Bacteria Bacteria 54.7 0.008   NTclustered gi|1898704378|dbj|AP018712.1| 2108365 g89817 i0 100 0.183279742765273 29 0 9 0 261 289 2036691 2036663 Tepiditoga spiralis sy52 DNA, complete genome blastn 57 54.7 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae Tepiditoga Tepiditoga spiralis
29211482 29211482 PRJNA983848_P_NODE_127469_length_264_cov_2.041885_g121586_i0 PRJNA983848 127469 264 2.041885 5.3905764 Bacteria 2 Bacteria Bacteria 47 0.00165   NR HPC24980.1 1871331 g121586 i0 42.9 1.43181818181818 63 35 70.5 1 252 67 606 668 HPC24980.1 hypothetical protein [Fervidobacterium sp.] diamond 378 47 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;