contig_metadata
19 rows where bioproject = "PRJNA983848", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 968455 | 968455 | PRJNA983848_P_NODE_167761_length_198_cov_6.832000_g161878_i0 | PRJNA983848 | 167761 | 198 | 6.832 | 13.52736 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 182 | 2.0999999999999996e-41 | NTclustered | gi|169977285|emb|AM946600.1| | 52 | g161878 | i0 | 86.127 | 83.9393939393939 | 173 | 18 | 86 | 5 | 2 | 171 | 2664 | 2833 | Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 | blastn | 16620 | 182 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 7345832 | 7345832 | PRJNA983848_P_NODE_156506_length_243_cov_11.835294_g150623_i0 | PRJNA983848 | 156506 | 243 | 11.835294 | 28.75976442 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 390 | 4.089999999999999e-104 | NTclustered | gi|1958041644|gb|CP064980.1| | 2026763 | g150623 | i0 | 95.851 | 149.757201646091 | 241 | 10 | 99 | 0 | 3 | 243 | 1308903 | 1308663 | Myxococcales bacterium isolate Fred_18-Q3-R57-64_BAT3C.417 chromosome | blastn | 36391 | 390 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 7649559 | 7649559 | PRJNA983848_P_NODE_160626_length_242_cov_0.923077_g154743_i0 | PRJNA983848 | 160626 | 242 | 0.923077 | 2.23384634 | Sorangium | 39643 | Bacteria | Bacteria | 296 | 9.12e-76 | NTclustered | gi|507148211|ref|NR_103018.1| | 56 | g154743 | i0 | 88.843 | 103.090909090909 | 242 | 26 | 99 | 1 | 2 | 242 | 509 | 268 | Sorangium cellulosum strain So ce 56 23S ribosomal RNA gene, complete sequence | blastn | 24948 | 296 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 8620457 | 8620457 | PRJNA983848_P_NODE_137627_length_253_cov_1.333333_g131744_i0 | PRJNA983848 | 137627 | 253 | 1.333333 | 3.37333249 | Corallococcus sp. EGB | 1521117 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|2094564806|gb|CP079946.1| | 1521117 | g131744 | i0 | 100 | 227.217391304348 | 253 | 0 | 100 | 0 | 1 | 253 | 113692 | 113944 | Corallococcus sp. EGB chromosome, complete genome | blastn | 57486 | 468 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. EGB | ||
| 8924423 | 8924423 | PRJNA983848_P_NODE_159007_length_242_cov_1.846154_g153124_i0 | PRJNA983848 | 159007 | 242 | 1.846154 | 4.46769268 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 206 | 1.58e-48 | NTclustered | gi|827418478|gb|CP011509.1| | 48 | g153124 | i0 | 85.149 | 129.425619834711 | 202 | 28 | 91 | 2 | 19 | 220 | 108631 | 108432 | Archangium gephyra strain DSM 2261, complete genome | blastn | 31321 | 207 | 0.995169082125604 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 12447636 | 12447636 | PRJNA983848_P_NODE_166710_length_218_cov_8.841379_g160827_i0 | PRJNA983848 | 166710 | 218 | 8.841379 | 19.27420622 | Minicystis rosea | 888845 | Bacteria | Bacteria | 213 | 8.35e-51 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g160827 | i0 | 84.615 | 765.146788990826 | 221 | 27 | 100 | 7 | 1 | 218 | 768847 | 769063 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 166802 | 213 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 14999245 | 14999245 | PRJNA983848_P_NODE_94872_length_312_cov_1.966527_g88989_i0 | PRJNA983848 | 94872 | 312 | 1.966527 | 6.13556424 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 555 | 1.8199999999999994e-153 | NTclustered | gi|2809270164|gb|CP102577.1| | 2316736 | g88989 | i0 | 98.718 | 243.967948717949 | 312 | 4 | 100 | 0 | 1 | 312 | 88290 | 87979 | Corallococcus exercitus strain SDU142 chromosome, complete genome | blastn | 76118 | 555 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus | ||
| 17548083 | 17548083 | PRJNA983848_P_NODE_63914_length_402_cov_11.659574_g58032_i0 | PRJNA983848 | 63914 | 402 | 11.659574 | 46.87148748 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 544 | 5.22e-150 | NTclustered | gi|1958041644|gb|CP064980.1| | 2026763 | g58032 | i0 | 91.414 | 165.6592039801 | 396 | 34 | 99 | 0 | 7 | 402 | 1308712 | 1308317 | Myxococcales bacterium isolate Fred_18-Q3-R57-64_BAT3C.417 chromosome | blastn | 66595 | 544 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 19122874 | 19122874 | PRJNA983848_P_NODE_162795_length_236_cov_2.196319_g156912_i0 | PRJNA983848 | 162795 | 236 | 2.196319 | 5.18331284 | Bacteria | 2 | Bacteria | Bacteria | 279 | 8.92e-71 | NTclustered | gi|297170971|gb|GU567972.1| | 723556 | g156912 | i0 | 88.136 | 162.28813559322 | 236 | 26 | 100 | 2 | 1 | 236 | 28102 | 27869 | Uncultured myxobacterium HF0200_01L06 genomic sequence | blastn | 38300 | 281 | 0.99288256227758 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | uncultured myxobacterium HF0200_01L06 | ||||
| 20094882 | 20094882 | PRJNA983848_P_NODE_167256_length_207_cov_15.380597_g161373_i0 | PRJNA983848 | 167256 | 207 | 15.380597 | 31.83783579 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 161 | 2.8799999999999997e-35 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g161373 | i0 | 80.861 | 110.763285024155 | 209 | 37 | 100 | 3 | 1 | 207 | 1313734 | 1313941 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 22928 | 161 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 23923931 | 23923931 | PRJNA983848_P_NODE_96279_length_309_cov_5.665254_g90396_i0 | PRJNA983848 | 96279 | 309 | 5.665254 | 17.50563486 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 346 | 1.18e-90 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g90396 | i0 | 87.138 | 142.019417475728 | 311 | 33 | 100 | 6 | 1 | 309 | 9678217 | 9677912 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 43884 | 346 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 26937268 | 26937268 | PRJNA983848_P_NODE_154302_length_245_cov_0.906977_g148419_i0 | PRJNA983848 | 154302 | 245 | 0.906977 | 2.22209365 | Bacteria | 2 | Bacteria | Bacteria | 52.8 | 1.11e-5 | NR | MCB9739322.1 | 2026735 | g148419 | i0 | 38.3 | 4.84897959183674 | 81 | 49 | 99.2 | 1 | 1 | 243 | 74 | 153 | MCB9739322.1 ATP-binding cassette domain-containing protein [Deltaproteobacteria bacterium] | diamond | 1188 | 53.1 | 0.994350282485876 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27847518 | 27847518 | PRJNA983848_P_NODE_139224_length_252_cov_1.698324_g133341_i0 | PRJNA983848 | 139224 | 252 | 1.698324 | 4.27977648 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 42.7 | 0.0404 | NR | HEU4429896.1 | 2818507 | g133341 | i0 | 45.7 | 0.547619047619048 | 46 | 25 | 54.8 | 0 | 193 | 56 | 13 | 58 | HEU4429896.1 rhomboid family intramembrane serine protease [Myxococcota bacterium] | diamond | 138 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 29268307 | 29268307 | PRJNA983848_P_NODE_96929_length_308_cov_2.063830_g91046_i0 | PRJNA983848 | 96929 | 308 | 2.06383 | 6.3565964 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 43.5 | 0.035 | NR | MEE2703528.1 | 2818507 | g91046 | i0 | 39.2 | 0.496753246753247 | 51 | 31 | 49.7 | 0 | 291 | 139 | 97 | 147 | MEE2703528.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase [Myxococcota bacterium] | diamond | 153 | 43.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 30822229 | 30822229 | PRJNA983848_P_NODE_62934_length_407_cov_2.401198_g57052_i0 | PRJNA983848 | 62934 | 407 | 2.401198 | 9.77287586 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 53.9 | 2.82e-5 | NR | MBW2606464.1 | 2026735 | g57052 | i0 | 32.3 | 3.62653562653563 | 96 | 62 | 69.3 | 3 | 73 | 354 | 164 | 258 | MBW2606464.1 insulinase family protein [Deltaproteobacteria bacterium] | diamond | 1476 | 54.3 | 0.992633517495396 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 31005797 | 31005797 | PRJNA983848_P_NODE_143514_length_250_cov_0.881356_g137631_i0 | PRJNA983848 | 143514 | 250 | 0.881356 | 2.20339 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 92.4 | 1.23e-19 | NR | MBL8685666.1 | 2026763 | g137631 | i0 | 62 | 1.932 | 79 | 30 | 94.8 | 0 | 249 | 13 | 268 | 346 | MBL8685666.1 deoxyribodipyrimidine photo-lyase [Myxococcales bacterium] | diamond | 483 | 92.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31258640 | 31258640 | PRJNA983848_P_NODE_159955_length_242_cov_0.923077_g154072_i0 | PRJNA983848 | 159955 | 242 | 0.923077 | 2.23384634 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 138 | 2.2899999999999998e-38 | NR | HEX2673937.1 | 2268199 | g154072 | i0 | 85 | 0.991735537190083 | 80 | 12 | 99.2 | 0 | 2 | 241 | 167 | 246 | HEX2673937.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 240 | 138 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31416787 | 31416787 | PRJNA983848_P_NODE_107016_length_291_cov_1.935780_g101133_i0 | PRJNA983848 | 107016 | 291 | 1.93578 | 5.6331198 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 41.2 | 0.0424 | NR | HEY7954277.1 | 3058050 | g101133 | i0 | 29.9 | 0.690721649484536 | 67 | 44 | 69.1 | 1 | 16 | 216 | 11 | 74 | HEY7954277.1 hypothetical protein [Polyangia bacterium] | diamond | 201 | 41.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 32681398 | 32681398 | PRJNA983848_P_NODE_1120_length_5476_cov_8.243568_g860_i0 | PRJNA983848 | 1120 | 5476 | 8.243568 | 451.41778368 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 100 | 5.46e-17 | NR | MCC6623602.1 | 2026735 | g860 | i0 | 32.5 | 0.12490869247626 | 228 | 99 | 11.1 | 8 | 839 | 1447 | 624 | 821 | MCC6623602.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 684 | 100 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;