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contig_metadata

11 rows where bioproject = "PRJNA983848", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 11 ✖

tax_kingdom 1

  • Pseudomonadati · 11 ✖

bioproject 1

  • PRJNA983848 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20094198 20094198 PRJNA983848_P_NODE_147036_length_248_cov_1.508571_g141153_i0 PRJNA983848 147036 248 1.508571 3.74125608 Geothrix sp. 21YS21S-2 3068893 Bacteria Bacteria 54.7 0.006   NTclustered gi|2566094019|gb|CP132910.1| 3068893 g141153 i0 100 0.116935483870968 29 0 12 0 107 135 2203607 2203635 Geothrix sp. 21YS21S-2 chromosome, complete genome blastn 29 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp. 21YS21S-2
26646211 26646211 PRJNA983848_P_NODE_131241_length_260_cov_1.593583_g125358_i0 PRJNA983848 131241 260 1.593583 4.1433158 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 47.8 3.31e-4   NR HEY2945801.1 2793154 g125358 i0 46.8 0.542307692307692 47 25 54.2 0 85 225 13 59 HEY2945801.1 acyl-CoA dehydrogenase family protein [Vicinamibacteria bacterium] diamond 141 47.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
28068624 28068624 PRJNA983848_P_NODE_122465_length_270_cov_1.959391_g116582_i0 PRJNA983848 122465 270 1.959391 5.2903557 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0497   NR MCL4524571.1 1978231 g116582 i0 39.3 0.677777777777778 61 34 67.8 2 62 244 183 240 MCL4524571.1 ATP-binding protein [Acidobacteriota bacterium] diamond 183 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28289524 28289524 PRJNA983848_P_NODE_155866_length_244_cov_0.912281_g149983_i0 PRJNA983848 155866 244 0.912281 2.22596564 Chloracidobacterium sp. 2099375 Bacteria Bacteria 147 4.25e-40   NR MBK7391840.1 2099375 g149983 i0 82.5 2.93852459016393 80 14 98.4 0 242 3 356 435 MBK7391840.1 glutamate--tRNA ligase [Chloracidobacterium sp.] diamond 717 147 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium sp.
30026478 30026478 PRJNA983848_P_NODE_140431_length_252_cov_0.871508_g134548_i0 PRJNA983848 140431 252 0.871508 2.19620016 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 60.8 1.08e-8   NR HVG86686.1 2910147 g134548 i0 67.3 1.30952380952381 55 14 61.9 2 156 1 200 253 HVG86686.1 cytochrome c3 family protein [Vicinamibacterales bacterium] diamond 330 60.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30342833 30342833 PRJNA983848_P_NODE_156372_length_244_cov_0.912281_g150489_i0 PRJNA983848 156372 244 0.912281 2.22596564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 145 4.019999999999999e-40   NR MBM3737160.1 1978231 g150489 i0 85.2 0.995901639344262 81 12 99.6 0 1 243 134 214 MBM3737160.1 Ldh family oxidoreductase [Acidobacteriota bacterium] diamond 243 145 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30658250 30658250 PRJNA983848_P_NODE_114113_length_281_cov_1.658654_g108230_i0 PRJNA983848 114113 281 1.658654 4.66081774 Terriglobia bacterium 2081523 Bacteria Bacteria 48.5 5.55e-4   NR HXJ94687.1 2081523 g108230 i0 38.6 0.608540925266904 57 35 60.9 0 279 109 494 550 HXJ94687.1 reverse transcriptase domain-containing protein [Terriglobia bacterium] diamond 171 48.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
32176226 32176226 PRJNA983848_P_NODE_149298_length_247_cov_0.896552_g143415_i0 PRJNA983848 149298 247 0.896552 2.21448344 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.1 0.00574   NR MXY25396.1 1978231 g143415 i0 51.2 0.522267206477733 43 19 49.8 1 246 124 225 267 MXY25396.1 dTDP-glucose 4,6-dehydratase [Acidobacteriota bacterium] diamond 129 45.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32618677 32618677 PRJNA983848_P_NODE_111020_length_285_cov_2.273585_g105137_i0 PRJNA983848 111020 285 2.273585 6.47971725 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.5 0.0329   NR MBI4874027.1 1978231 g105137 i0 34.5 0.610526315789474 58 35 57.9 1 251 87 777 834 MBI4874027.1 hypothetical protein [Acidobacteriota bacterium] diamond 174 43.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32776068 32776068 PRJNA983848_P_NODE_158040_length_243_cov_0.917647_g152157_i0 PRJNA983848 158040 243 0.917647 2.22988221 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 62 4.84e-9   NR HQU84504.1 2283092 g152157 i0 39.7 0.962962962962963 78 47 96.3 0 236 3 104 181 HQU84504.1 TSUP family transporter [Pyrinomonadaceae bacterium] diamond 234 62 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32807578 32807578 PRJNA983848_P_NODE_132840_length_258_cov_1.686486_g126957_i0 PRJNA983848 132840 258 1.686486 4.35113388 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 40.8 0.0339   NR HEX3942023.1 2052142 g126957 i0 40.8 0.569767441860465 49 29 57 0 3 149 3 51 HEX3942023.1 type II toxin-antitoxin system YafQ family toxin [Acidobacteriaceae bacterium] diamond 147 40.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;