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contig_metadata

21 rows where bioproject = "PRJNA983848", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 21 ✖

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJNA983848 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2244647 2244647 PRJNA983848_P_NODE_45002_length_538_cov_3.449462_g39136_i0 PRJNA983848 45002 538 3.449462 18.55810556 root 1 Root_unresolved Root_unresolved 317 9.339999999999998e-107   NR CAD8081379.1 5886 g39136 i0 94.2 44.7379182156134 156 9 87 0 70 537 1 156 CAD8081379.1 unnamed protein product [Paramecium primaurelia] diamond 24069 317 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
4796372 4796372 PRJNA983848_P_NODE_166424_length_224_cov_17.761589_g160541_i0 PRJNA983848 166424 224 17.761589 39.78595936 Cryptocaryon irritans 153251 SAR_Eukaryotes SAR_Eukaryotes 99 2.52e-16   NTclustered gi|1004125725|gb|KU761582.1| 153251 g160541 i0 83.178 0.955357142857143 107 18 48 0 115 221 56 162 Cryptocaryon irritans isolate ND1410 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and intergenic spacer, complete sequence blastn 214 99 1 Eukaryota Sar   Ciliophora       Cryptocaryon Cryptocaryon irritans
4799372 4799372 PRJNA983848_P_NODE_99464_length_303_cov_216.400000_g93581_i0 PRJNA983848 99464 303 216.4 655.692 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 455 1.84e-123   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g93581 i0 93.75 35.2112211221122 304 17 100 2 1 303 61 363 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 10669 455 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6070317 6070317 PRJNA983848_P_NODE_126365_length_265_cov_3.890625_g120482_i0 PRJNA983848 126365 265 3.890625 10.31015625 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 427 3.44e-115   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g120482 i0 95.833 6.1622641509434 264 11 99 0 2 265 325 62 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1633 427 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
7343937 7343937 PRJNA983848_P_NODE_101206_length_300_cov_320.515419_g95323_i0 PRJNA983848 101206 300 320.515419 961.546257 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 466 8.41e-127   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g95323 i0 94.667 23.01 300 16 100 0 1 300 686 387 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 6903 466 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9896613 9896613 PRJNA983848_P_NODE_167408_length_205_cov_4.151515_g161525_i0 PRJNA983848 167408 205 4.151515 8.51060575 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 374 3.3599999999999997e-99   NTclustered gi|10782|emb|X54004.1| 5908 g161525 i0 99.512 10.3707317073171 205 1 100 0 1 205 3066 3270 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 2126 374 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
9897048 9897048 PRJNA983848_P_NODE_30048_length_806_cov_120.245566_g24511_i0 PRJNA983848 30048 806 120.245566 969.17926196 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 1375 0   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g24511 i0 97.631 54.4032258064516 802 17 99 2 2 802 2297 1497 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 43849 1375 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
9899364 9899364 PRJNA983848_P_NODE_91428_length_319_cov_1.743902_g85545_i0 PRJNA983848 91428 319 1.743902 5.56304738 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 361 4.38e-95   NTclustered gi|347439269|gb|JN111982.1| 151077 g85545 i0 87.188 13.4043887147335 320 37 100 3 1 319 348 32 Chilodonella uncinata strain USA_WH small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 4276 361 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12750807 12750807 PRJNA983848_P_NODE_59350_length_425_cov_206.747159_g53469_i0 PRJNA983848 59350 425 206.747159 878.67542575 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 246 1.75e-60   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g53469 i0 97.887 1.70823529411765 142 3 33 0 37 178 2941 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 726 246 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
13720816 13720816 PRJNA983848_P_NODE_130291_length_261_cov_1.654255_g124408_i0 PRJNA983848 130291 261 1.654255 4.31760555 Ancistrum crassum 880990 SAR_Eukaryotes SAR_Eukaryotes 324 4.57e-84   NTclustered gi|514076835|gb|KF256825.1| 880990 g124408 i0 89.655 9.96168582375479 261 18 99 8 3 261 1775 1522 Ancistrum crassum isolate FXP2009031601 large subunit ribosomal RNA gene, partial sequence blastn 2600 324 1 Eukaryota Sar   Ciliophora Oligohymenophorea Thigmotrichida Ancistridae Ancistrum Ancistrum crassum
22646913 22646913 PRJNA983848_P_NODE_54718_length_454_cov_110.753281_g48839_i0 PRJNA983848 54718 454 110.753281 502.81989574 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 749 0   NTclustered gi|2651357791|gb|PP174306.1| 41631 g48839 i0 97.494 88.3193832599119 439 10 97 1 16 454 3237 3674 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 40097 749 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
22949214 22949214 PRJNA983848_P_NODE_103018_length_297_cov_9.424107_g97135_i0 PRJNA983848 103018 297 9.424107 27.98959779 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 549 8.029999999999997e-152   NTclustered gi|2065561668|gb|MZ540265.1| 44029 g97135 i0 100 99.6430976430976 297 0 100 0 1 297 326 30 Paramecium jenningsi isolate UR02 small subunit ribosomal RNA gene, partial sequence blastn 29594 549 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium jenningsi
23920341 23920341 PRJNA983848_P_NODE_146319_length_248_cov_4.228571_g140436_i0 PRJNA983848 146319 248 4.228571 10.48685608 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 448 2.4499999999999996e-121   NTclustered gi|10782|emb|X54004.1| 5908 g140436 i0 99.194 100.979838709677 248 2 100 0 1 248 1610 1857 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 25043 448 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
25193876 25193876 PRJNA983848_P_NODE_144400_length_249_cov_4.181818_g138517_i0 PRJNA983848 144400 249 4.181818 10.41272682 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 449 6.840000000000001e-122   NTclustered gi|90657156|gb|DQ442814.1| 35100 g138517 i0 99.197 12.3373493975904 249 2 100 0 1 249 425 673 Cyclidium glaucoma isolate ES39 28S ribosomal RNA gene, partial sequence blastn 3072 449 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
25194263 25194263 PRJNA983848_P_NODE_156140_length_244_cov_0.912281_g150257_i0 PRJNA983848 156140 244 0.912281 2.22596564 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 124 8.729999999999998e-31   NR KRX08195.1 266149 g150257 i0 70.4 2.98770491803279 81 24 99.6 0 1 243 289 369 KRX08195.1 hypothetical protein PPERSA_12350 [Pseudocohnilembus persalinus] diamond 729 124 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
25196626 25196626 PRJNA983848_P_NODE_71880_length_371_cov_2.493289_g65997_i0 PRJNA983848 71880 371 2.493289 9.25010219 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 649 0   NTclustered gi|821392666|gb|KR005626.1| 1654720 g65997 i0 100 50.1428571428571 351 0 95 0 1 351 107 457 Chilodonella piscicola 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence; macronuclear blastn 18603 649 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
25497935 25497935 PRJNA983848_P_NODE_124800_length_267_cov_2.551546_g118917_i0 PRJNA983848 124800 267 2.551546 6.81262782 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 156 1.81e-33   NTclustered gi|49616744|gb|AY643504.1| 282688 g118917 i0 85.526 2.53558052434457 152 19 56 3 91 240 101 251 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 677 156 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
26868345 26868345 PRJNA983848_P_NODE_41501_length_581_cov_1.694882_g35658_i0 PRJNA983848 41501 581 1.694882 9.84726442 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 53.5 3.1e-5   NR CDW86772.1 5949 g35658 i0 44.6 0.428571428571429 83 37 41.3 3 7 246 63 139 CDW86772.1 UNKNOWN [Stylonychia lemnae] diamond 249 53.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
27279311 27279311 PRJNA983848_P_NODE_85223_length_333_cov_1.734615_g79340_i0 PRJNA983848 85223 333 1.734615 5.77626795 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 88.2 1.25e-17   NR CAG9311321.1 1481888 g79340 i0 41.7 2.73873873873874 103 57 92.8 2 323 15 322 421 CAG9311321.1 unnamed protein product [Blepharisma stoltei] diamond 912 88.2 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
30152489 30152489 PRJNA983848_P_NODE_143712_length_250_cov_0.881356_g137829_i0 PRJNA983848 143712 250 0.881356 2.20339 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 66.6 1.53e-10   NR CAG9333366.1 1481888 g137829 i0 38.6 3.984 83 51 99.6 0 250 2 370 452 CAG9333366.1 unnamed protein product [Blepharisma stoltei] diamond 996 66.6 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
32839030 32839030 PRJNA983848_P_NODE_121980_length_271_cov_1.373737_g116097_i0 PRJNA983848 121980 271 1.373737 3.72282727 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 123 1.81e-33   NR CAG9318382.1 1481888 g116097 i0 74.6 0.785977859778598 71 18 78.6 0 264 52 64 134 CAG9318382.1 unnamed protein product [Blepharisma stoltei] diamond 213 123 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;