RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA983848", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA983848 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27342642 27342642 PRJNA983848_P_NODE_52743_length_469_cov_1.085859_g46865_i0 PRJNA983848 52743 469 1.085859 5.09267871 Prymnesium parvum 97485 Haptophyta other_Eukaryota 52.8 1.24e-4   NR KAL1516026.1 97485 g46865 i0 27.3 2.31556503198294 110 77 70.4 1 469 140 654 760 KAL1516026.1 hypothetical protein AB1Y20_002639 [Prymnesium parvum] diamond 1086 52.8 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
29300050 29300050 PRJNA983848_P_NODE_137069_length_253_cov_2.266667_g131186_i0 PRJNA983848 137069 253 2.266667 5.73466751 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 67.4 6.6e-11   NR KAJ1620725.1 483367 g131186 i0 47.9 0.841897233201581 71 35 81.8 1 218 12 39 109 KAJ1620725.1 hypothetical protein T492DRAFT_1075670 [Pavlovales sp. CCMP2436] diamond 213 67.4 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;