contig_metadata
10 rows where bioproject = "PRJNA983838" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 965518 | 965518 | PRJNA983838_P_NODE_69321_length_333_cov_2.138462_g66954_i0 | PRJNA983838 | 69321 | 333 | 2.138462 | 7.12107846 | Pendulispora brunnea | 2905690 | Bacteria | Bacteria | 490 | 5.609999999999998e-134 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g66954 | i0 | 93.134 | 132.177177177177 | 335 | 21 | 100 | 2 | 1 | 333 | 7408486 | 7408152 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 44015 | 490 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 4792812 | 4792812 | PRJNA983838_P_NODE_114104_length_245_cov_1.813953_g111737_i0 | PRJNA983838 | 114104 | 245 | 1.813953 | 4.44418485 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 167 | 2.5e-48 | NR | HZR07132.1 | 2026763 | g111737 | i0 | 96.3 | 9.91836734693878 | 81 | 3 | 99.2 | 0 | 244 | 2 | 336 | 416 | HZR07132.1 NADH-quinone oxidoreductase subunit NuoF [Myxococcales bacterium] | diamond | 2430 | 167 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 4792894 | 4792894 | PRJNA983838_P_NODE_119764_length_240_cov_2.251497_g117397_i0 | PRJNA983838 | 119764 | 240 | 2.251497 | 5.4035928 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 359 | 1.1399999999999999e-94 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g117397 | i0 | 94.068 | 126.95 | 236 | 14 | 98 | 0 | 5 | 240 | 3942339 | 3942104 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 30468 | 359 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 17543759 | 17543759 | PRJNA983838_P_NODE_86314_length_285_cov_1.933962_g83947_i0 | PRJNA983838 | 86314 | 285 | 1.933962 | 5.5117917 | Polyangium | 55 | Bacteria | Bacteria | 86.7 | 2.15e-17 | NR | MBX3154999.1 | 2026735 | g83947 | i0 | 55.7 | 2.68421052631579 | 79 | 35 | 83.2 | 0 | 2 | 238 | 212 | 290 | MBX3154999.1 serine/threonine protein kinase [Deltaproteobacteria bacterium] | diamond | 765 | 87 | 0.996551724137931 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 26773158 | 26773158 | PRJNA983838_P_NODE_118301_length_242_cov_1.662722_g115934_i0 | PRJNA983838 | 118301 | 242 | 1.662722 | 4.02378724 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 124 | 1.75e-31 | NR | HXU81125.1 | 3058050 | g115934 | i0 | 80 | 0.991735537190083 | 80 | 16 | 99.2 | 0 | 241 | 2 | 234 | 313 | HXU81125.1 serine/threonine-protein kinase [Polyangia bacterium] | diamond | 240 | 124 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 27979938 | 27979938 | PRJNA983838_P_NODE_119905_length_239_cov_2.819277_g117538_i0 | PRJNA983838 | 119905 | 239 | 2.819277 | 6.73807203 | Bacteria | 2 | Bacteria | Bacteria | 107 | 5.05e-26 | NR | NOU32087.1 | 2268199 | g117538 | i0 | 87.1 | 1.55648535564854 | 62 | 8 | 77.8 | 0 | 237 | 52 | 232 | 293 | NOU32087.1 ParB N-terminal domain-containing protein [Polyangiaceae bacterium] | diamond | 372 | 107 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31764672 | 31764672 | PRJNA983838_P_NODE_103237_length_254_cov_2.469613_g100870_i0 | PRJNA983838 | 103237 | 254 | 2.469613 | 6.27281702 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 90.9 | 1.58e-20 | NR | MBK6684789.1 | 2026735 | g100870 | i0 | 76.7 | 1.45275590551181 | 60 | 14 | 70.9 | 0 | 2 | 181 | 136 | 195 | MBK6684789.1 orotate phosphoribosyltransferase [Deltaproteobacteria bacterium] | diamond | 369 | 90.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32460880 | 32460880 | PRJNA983838_P_NODE_104459_length_253_cov_0.866667_g102092_i0 | PRJNA983838 | 104459 | 253 | 0.866667 | 2.19266751 | Hyalangium versicolor | 2861190 | Bacteria | Bacteria | 85.9 | 2.82e-17 | NR | WP_224366897.1 | 2861190 | g102092 | i0 | 43.9 | 0.972332015810277 | 82 | 45 | 96 | 1 | 243 | 1 | 668 | 749 | WP_224366897.1 PAS domain-containing protein [Hyalangium versicolor] | diamond | 246 | 85.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Hyalangium | Hyalangium versicolor | ||
| 32744787 | 32744787 | PRJNA983838_P_NODE_118740_length_242_cov_0.923077_g116373_i0 | PRJNA983838 | 118740 | 242 | 0.923077 | 2.23384634 | Labilithrix sp. | 1971228 | Bacteria | Bacteria | 83.2 | 5.73e-17 | NR | MBX3192365.1 | 1971228 | g116373 | i0 | 52.6 | 0.942148760330578 | 76 | 36 | 94.2 | 0 | 241 | 14 | 205 | 280 | MBX3192365.1 hypothetical protein [Labilithrix sp.] | diamond | 228 | 83.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 32901944 | 32901944 | PRJNA983838_P_NODE_54360_length_402_cov_2.167173_g51993_i0 | PRJNA983838 | 54360 | 402 | 2.167173 | 8.71203546 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 48.5 | 0.00176 | NR | MEO1272424.1 | 2818507 | g51993 | i0 | 59.4 | 0.805970149253731 | 32 | 13 | 23.9 | 0 | 6 | 101 | 250 | 281 | MEO1272424.1 Kazal-type serine protease inhibitor domain-containing protein [Myxococcota bacterium] | diamond | 324 | 48.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;