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contig_metadata

12 rows where bioproject = "PRJNA983838", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 12 ✖

tax_phylum 1

  • Acidobacteriota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA983838 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
964622 964622 PRJNA983838_P_NODE_108781_length_249_cov_2.494318_g106414_i0 PRJNA983838 108781 249 2.494318 6.21085182 Acidobacteriota bacterium 1978231 Bacteria Bacteria 279 9.5e-71   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g106414 i0 90.521 161.044176706827 211 20 85 0 1 211 4652053 4652263 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 40100 279 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
4792830 4792830 PRJNA983838_P_NODE_114764_length_245_cov_0.906977_g112397_i0 PRJNA983838 114764 245 0.906977 2.22209365 Paludibaculum fermentans 1473598 Bacteria Bacteria 235 2.05e-57   NTclustered gi|1929489624|gb|CP063849.1| 1473598 g112397 i0 90.96 281.477551020408 177 12 72 3 35 210 4785881 4785708 Paludibaculum fermentans strain P105 chromosome, complete genome blastn 68962 235 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Paludibaculum Paludibaculum fermentans
7342547 7342547 PRJNA983838_P_NODE_114786_length_245_cov_0.906977_g112419_i0 PRJNA983838 114786 245 0.906977 2.22209365 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 270 5.609999999999999e-68   NTclustered gi|2874253692|emb|OY969418.1| 171953 g112419 i0 86.939 113.930612244898 245 27 99 5 1 242 4231852 4231610 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 27913 270 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
14992458 14992458 PRJNA983838_P_NODE_102572_length_255_cov_2.747253_g100205_i0 PRJNA983838 102572 255 2.747253 7.00549515 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 127 3.4e-34   NR HKZ32703.1 2793154 g100205 i0 65.1 2.92941176470588 83 29 97.6 0 254 6 135 217 HKZ32703.1 superoxide dismutase [Vicinamibacteria bacterium] diamond 747 127 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
26741037 26741037 PRJNA983838_P_NODE_38821_length_533_cov_1.223913_g36461_i0 PRJNA983838 38821 533 1.223913 6.52345629 Acidobacteriota bacterium 1978231 Bacteria Bacteria 47.8 0.00834   NR NOZ77945.1 1978231 g36461 i0 42.2 0.360225140712946 64 31 32.6 1 304 477 228 291 NOZ77945.1 GNAT family N-acetyltransferase [Acidobacteriota bacterium] diamond 192 47.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26994430 26994430 PRJNA983838_P_NODE_53462_length_408_cov_1.164179_g51095_i0 PRJNA983838 53462 408 1.164179 4.74985032 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 51.2 1.72e-4   NR HXK08188.1 2793154 g51095 i0 38.6 0.742647058823529 101 48 72.1 3 15 308 150 239 HXK08188.1 GDSL-type esterase/lipase family protein [Vicinamibacteria bacterium] diamond 303 51.2 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
27942473 27942473 PRJNA983838_P_NODE_84785_length_288_cov_2.158140_g82418_i0 PRJNA983838 84785 288 2.15814 6.2154432 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 88.6 4.82e-18   NR HTA46279.1 2212468 g82418 i0 70.2 0.59375 57 17 59.4 0 288 118 478 534 HTA46279.1 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [Bryobacteraceae bacterium] diamond 171 88.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28668696 28668696 PRJNA983838_P_NODE_108147_length_250_cov_0.881356_g105780_i0 PRJNA983838 108147 250 0.881356 2.20339 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 49.3 1.92e-4   NR MEZ5292908.1 2910147 g105780 i0 32.9 0.984 82 52 98.4 2 5 250 275 353 MEZ5292908.1 hypothetical protein [Vicinamibacterales bacterium] diamond 246 49.3 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29994912 29994912 PRJNA983838_P_NODE_118931_length_242_cov_0.923077_g116564_i0 PRJNA983838 118931 242 0.923077 2.23384634 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 82.4 3.94e-16   NR MBV8068816.1 2052142 g116564 i0 49.3 1.82231404958678 73 37 90.5 0 20 238 390 462 MBV8068816.1 glycosyltransferase [Acidobacteriaceae bacterium] diamond 441 82.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
30974316 30974316 PRJNA983838_P_NODE_113354_length_246_cov_0.901734_g110987_i0 PRJNA983838 113354 246 0.901734 2.21826564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.1 0.00591   NR MBS1827897.1 1978231 g110987 i0 31.3 0.975609756097561 80 47 89 3 233 15 508 586 MBS1827897.1 hypothetical protein [Acidobacteriota bacterium] diamond 240 45.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31707399 31707399 PRJNA983838_P_NODE_102157_length_256_cov_1.704918_g99790_i0 PRJNA983838 102157 256 1.704918 4.36459008 Pseudomonadati 3379134 Bacteria Bacteria 114 1.01e-27   NR MPZ19343.1 2004800 g99790 i0 61 3.85546875 82 32 96.1 0 11 256 376 457 MPZ19343.1 hypothetical protein [Luteitalea sp.] diamond 987 114 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp.
32618675 32618675 PRJNA983838_P_NODE_91380_length_275_cov_1.742574_g89013_i0 PRJNA983838 91380 275 1.742574 4.7920785 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 175 2.23e-51   NR HZB44364.1 2283092 g89013 i0 95.6 0.992727272727273 91 4 99.3 0 274 2 200 290 HZB44364.1 M48 family metallopeptidase [Pyrinomonadaceae bacterium] diamond 273 175 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;