RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA983838", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA983838 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6069325 6069325 PRJNA983838_P_NODE_96945_length_265_cov_1.510417_g94578_i0 PRJNA983838 96945 265 1.510417 4.00260505 Zoopagomycota 1913638 Fungi Fungi 162 1.57e-45   NR RKP36147.1 215637 g94578 i0 86 24.1018867924528 86 12 97.4 0 261 4 79 164 RKP36147.1 methylmalonyl-CoA mutase, partial [Dimargaris cristalligena] diamond 6387 162 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dimargaris Dimargaris cristalligena
7343254 7343254 PRJNA983838_P_NODE_61546_length_364_cov_2.601375_g59179_i0 PRJNA983838 61546 364 2.601375 9.469005 Eukaryota 2759 Fungi Fungi 150 2.16e-43   NR KAJ9052662.1 34485 g59179 i0 67.3 15.2967032967033 110 34 89 1 1 324 91 200 KAJ9052662.1 ribosomal protein S8A [Entomophthora muscae] diamond 5568 150 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;