contig_metadata
15 rows where bioproject = "PRJNA983838", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7343272 | 7343272 | PRJNA983838_P_NODE_62626_length_360_cov_1.087108_g60259_i0 | PRJNA983838 | 62626 | 360 | 1.087108 | 3.9135888 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g60259 | i0 | 99.444 | 194.488888888889 | 360 | 2 | 100 | 0 | 1 | 360 | 3804234 | 3803875 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 70016 | 654 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 10200119 | 10200119 | PRJNA983838_P_NODE_98368_length_262_cov_2.523810_g96001_i0 | PRJNA983838 | 98368 | 262 | 2.52381 | 6.6123822 | Verrucomicrobiaceae | 203557 | Bacteria | Bacteria | 481 | 2.57e-131 | NTclustered | gi|1969670428|gb|MW553372.1| | 670166 | g96001 | i0 | 100 | 100.797709923664 | 260 | 0 | 99 | 0 | 1 | 260 | 168 | 427 | Uncultured Haloferula sp. clone 49 16S ribosomal RNA gene, partial sequence | blastn | 26409 | 484 | 0.993801652892562 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Haloferula | uncultured Haloferula sp. | |
| 11168012 | 11168012 | PRJNA983838_P_NODE_105789_length_252_cov_0.871508_g103422_i0 | PRJNA983838 | 105789 | 252 | 0.871508 | 2.19620016 | Lacunisphaera sp. | 1961806 | Bacteria | Bacteria | 122 | 2.8799999999999997e-30 | NR | HEY0864123.1 | 1961806 | g103422 | i0 | 70.2 | 1.98809523809524 | 84 | 24 | 98.8 | 1 | 250 | 2 | 519 | 602 | HEY0864123.1 CHASE3 domain-containing protein [Lacunisphaera sp.] | diamond | 501 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera sp. | |
| 17542738 | 17542738 | PRJNA983838_P_NODE_119474_length_241_cov_2.315476_g117107_i0 | PRJNA983838 | 119474 | 241 | 2.315476 | 5.58029716 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 418 | 1.8599999999999995e-112 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g117107 | i0 | 97.925 | 289.141078838174 | 241 | 5 | 100 | 0 | 1 | 241 | 1320153 | 1319913 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 69683 | 418 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 17543719 | 17543719 | PRJNA983838_P_NODE_84054_length_290_cov_1.437788_g81687_i0 | PRJNA983838 | 84054 | 290 | 1.437788 | 4.1695852 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 353 | 6.57e-93 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g81687 | i0 | 88.66 | 1.00344827586207 | 291 | 31 | 100 | 2 | 1 | 290 | 722518 | 722807 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 291 | 353 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 18817785 | 18817785 | PRJNA983838_P_NODE_98735_length_262_cov_1.396825_g96368_i0 | PRJNA983838 | 98735 | 262 | 1.396825 | 3.6596815 | Luteolibacter | 518753 | Bacteria | Bacteria | 128 | 4.219999999999999e-32 | NR | MDP3851236.1 | 1962973 | g96368 | i0 | 90 | 6.46946564885496 | 70 | 7 | 80.2 | 0 | 260 | 51 | 828 | 897 | MDP3851236.1 DEAD/DEAH box helicase [Luteolibacter sp.] | diamond | 1695 | 129 | 0.992248062015504 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 22643188 | 22643188 | PRJNA983838_P_NODE_97638_length_264_cov_1.188482_g95271_i0 | PRJNA983838 | 97638 | 264 | 1.188482 | 3.13759248 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 477 | 3.359999999999999e-130 | NTclustered | gi|1554474302|gb|CP025823.1| | 239935 | g95271 | i0 | 99.242 | 91.9810606060606 | 264 | 2 | 100 | 0 | 1 | 264 | 785200 | 784937 | Akkermansia muciniphila strain EB-AMDK-7 chromosome, complete genome | blastn | 24283 | 477 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 27311060 | 27311060 | PRJNA983838_P_NODE_80343_length_299_cov_2.022124_g77976_i0 | PRJNA983838 | 80343 | 299 | 2.022124 | 6.04615076 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 85.9 | 1.48e-18 | NR | HKB90181.1 | 2006848 | g77976 | i0 | 46.5 | 1.0133779264214 | 101 | 51 | 99.3 | 2 | 298 | 2 | 64 | 163 | HKB90181.1 shikimate kinase [Opitutaceae bacterium] | diamond | 303 | 85.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 28706254 | 28706254 | PRJNA983838_P_NODE_90487_length_277_cov_1.348039_g88120_i0 | PRJNA983838 | 90487 | 277 | 1.348039 | 3.73406803 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 162 | 8.04e-47 | NR | MFA6544388.1 | 2052186 | g88120 | i0 | 82.4 | 2.95667870036101 | 91 | 16 | 98.6 | 0 | 275 | 3 | 84 | 174 | MFA6544388.1 sialidase family protein [Limisphaerales bacterium] | diamond | 819 | 163 | 0.993865030674847 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Limisphaerales bacterium | |||
| 31226864 | 31226864 | PRJNA983838_P_NODE_46555_length_457_cov_5.156250_g44189_i0 | PRJNA983838 | 46555 | 457 | 5.15625 | 23.5640625 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 189 | 3.63e-56 | NR | RYD65414.1 | 2026800 | g44189 | i0 | 80.4 | 0.702407002188184 | 107 | 21 | 70.2 | 0 | 2 | 322 | 230 | 336 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 321 | 189 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32080999 | 32080999 | PRJNA983838_P_NODE_40178_length_517_cov_2.558559_g37817_i0 | PRJNA983838 | 40178 | 517 | 2.558559 | 13.22775003 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 256 | 2.62e-82 | NR | RYD81270.1 | 2026800 | g37817 | i0 | 71 | 0.940038684719536 | 162 | 47 | 94 | 0 | 511 | 26 | 177 | 338 | RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium] | diamond | 486 | 256 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32176211 | 32176211 | PRJNA983838_P_NODE_99898_length_260_cov_1.443850_g97531_i0 | PRJNA983838 | 99898 | 260 | 1.44385 | 3.75401 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 137 | 2.46e-35 | NR | RYD24189.1 | 2026800 | g97531 | i0 | 75.9 | 2.00769230769231 | 87 | 20 | 99.2 | 1 | 259 | 2 | 457 | 543 | RYD24189.1 MAG: hypothetical protein EOP88_01205 [Verrucomicrobiaceae bacterium] | diamond | 522 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32334487 | 32334487 | PRJNA983838_P_NODE_72799_length_321_cov_3.346774_g70432_i0 | PRJNA983838 | 72799 | 321 | 3.346774 | 10.74314454 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 145 | 3.749999999999999e-40 | NR | RYD65414.1 | 2026800 | g70432 | i0 | 71 | 1 | 107 | 29 | 100 | 1 | 321 | 1 | 135 | 239 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 321 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32460884 | 32460884 | PRJNA983838_P_NODE_56779_length_388_cov_2.434921_g54412_i0 | PRJNA983838 | 56779 | 388 | 2.434921 | 9.44749348 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 139 | 4.87e-37 | NR | RYD71398.1 | 2026800 | g54412 | i0 | 56.8 | 0.966494845360825 | 125 | 53 | 95.9 | 1 | 15 | 386 | 234 | 358 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 375 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32713097 | 32713097 | PRJNA983838_P_NODE_70420_length_329_cov_4.214844_g68053_i0 | PRJNA983838 | 70420 | 329 | 4.214844 | 13.86683676 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 94 | 3.9e-20 | NR | RYD71398.1 | 2026800 | g68053 | i0 | 48.3 | 0.811550151975684 | 89 | 46 | 81.2 | 0 | 15 | 281 | 105 | 193 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 267 | 94 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;