RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA983838", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA983838 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29868423 29868423 PRJNA983838_P_NODE_106071_length_252_cov_0.871508_g103704_i0 PRJNA983838 106071 252 0.871508 2.19620016 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.3 0.012   NR MEW5895405.1 2035772 g103704 i0 31.3 0.988095238095238 83 50 90.5 1 238 11 1043 1125 MEW5895405.1 PAS domain-containing protein [Candidatus Omnitrophota bacterium] diamond 249 44.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30437356 30437356 PRJNA983838_P_NODE_100873_length_258_cov_2.108108_g98506_i0 PRJNA983838 100873 258 2.108108 5.43891864 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 146 8.879999999999998e-43   NR MBU3758371.1 2035772 g98506 i0 98.8 0.988372093023256 85 1 98.8 0 257 3 50 134 MBU3758371.1 dicarboxylate/amino acid:cation symporter [Candidatus Omnitrophota bacterium] diamond 255 146 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;