contig_metadata
25 rows where bioproject = "PRJNA983838" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7343272 | 7343272 | PRJNA983838_P_NODE_62626_length_360_cov_1.087108_g60259_i0 | PRJNA983838 | 62626 | 360 | 1.087108 | 3.9135888 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g60259 | i0 | 99.444 | 194.488888888889 | 360 | 2 | 100 | 0 | 1 | 360 | 3804234 | 3803875 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 70016 | 654 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 7649378 | 7649378 | PRJNA983838_P_NODE_118326_length_242_cov_1.597633_g115959_i0 | PRJNA983838 | 118326 | 242 | 1.597633 | 3.86627186 | Planctomycetia | 203683 | Bacteria | Bacteria | 387 | 5.26e-103 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g115959 | i0 | 95.473 | 223.268595041322 | 243 | 9 | 100 | 2 | 1 | 242 | 122392 | 122633 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 54031 | 387 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 10200119 | 10200119 | PRJNA983838_P_NODE_98368_length_262_cov_2.523810_g96001_i0 | PRJNA983838 | 98368 | 262 | 2.52381 | 6.6123822 | Verrucomicrobiaceae | 203557 | Bacteria | Bacteria | 481 | 2.57e-131 | NTclustered | gi|1969670428|gb|MW553372.1| | 670166 | g96001 | i0 | 100 | 100.797709923664 | 260 | 0 | 99 | 0 | 1 | 260 | 168 | 427 | Uncultured Haloferula sp. clone 49 16S ribosomal RNA gene, partial sequence | blastn | 26409 | 484 | 0.993801652892562 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Haloferula | uncultured Haloferula sp. | |
| 11168012 | 11168012 | PRJNA983838_P_NODE_105789_length_252_cov_0.871508_g103422_i0 | PRJNA983838 | 105789 | 252 | 0.871508 | 2.19620016 | Lacunisphaera sp. | 1961806 | Bacteria | Bacteria | 122 | 2.8799999999999997e-30 | NR | HEY0864123.1 | 1961806 | g103422 | i0 | 70.2 | 1.98809523809524 | 84 | 24 | 98.8 | 1 | 250 | 2 | 519 | 602 | HEY0864123.1 CHASE3 domain-containing protein [Lacunisphaera sp.] | diamond | 501 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera sp. | |
| 12443747 | 12443747 | PRJNA983838_P_NODE_104370_length_253_cov_0.866667_g102003_i0 | PRJNA983838 | 104370 | 253 | 0.866667 | 2.19266751 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 172 | 1.8099999999999994e-48 | NR | MBX9626678.1 | 2052164 | g102003 | i0 | 100 | 0.99604743083004 | 84 | 0 | 99.6 | 0 | 1 | 252 | 93 | 176 | MBX9626678.1 HDOD domain-containing protein [Gemmataceae bacterium] | diamond | 252 | 172 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 17542738 | 17542738 | PRJNA983838_P_NODE_119474_length_241_cov_2.315476_g117107_i0 | PRJNA983838 | 119474 | 241 | 2.315476 | 5.58029716 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 418 | 1.8599999999999995e-112 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g117107 | i0 | 97.925 | 289.141078838174 | 241 | 5 | 100 | 0 | 1 | 241 | 1320153 | 1319913 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 69683 | 418 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 17543419 | 17543419 | PRJNA983838_P_NODE_66254_length_344_cov_3.324723_g63887_i0 | PRJNA983838 | 66254 | 344 | 3.324723 | 11.43704712 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 387 | 7.849999999999998e-103 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g63887 | i0 | 87.834 | 162.607558139535 | 337 | 32 | 96 | 7 | 1 | 329 | 7050921 | 7050586 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 55937 | 387 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 17543719 | 17543719 | PRJNA983838_P_NODE_84054_length_290_cov_1.437788_g81687_i0 | PRJNA983838 | 84054 | 290 | 1.437788 | 4.1695852 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 353 | 6.57e-93 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g81687 | i0 | 88.66 | 1.00344827586207 | 291 | 31 | 100 | 2 | 1 | 290 | 722518 | 722807 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 291 | 353 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 18817785 | 18817785 | PRJNA983838_P_NODE_98735_length_262_cov_1.396825_g96368_i0 | PRJNA983838 | 98735 | 262 | 1.396825 | 3.6596815 | Luteolibacter | 518753 | Bacteria | Bacteria | 128 | 4.219999999999999e-32 | NR | MDP3851236.1 | 1962973 | g96368 | i0 | 90 | 6.46946564885496 | 70 | 7 | 80.2 | 0 | 260 | 51 | 828 | 897 | MDP3851236.1 DEAD/DEAH box helicase [Luteolibacter sp.] | diamond | 1695 | 129 | 0.992248062015504 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 21673701 | 21673701 | PRJNA983838_P_NODE_118937_length_242_cov_0.923077_g116570_i0 | PRJNA983838 | 118937 | 242 | 0.923077 | 2.23384634 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 147 | 4.24e-39 | NR | MSR54156.1 | 2052164 | g116570 | i0 | 88.8 | 2.97520661157025 | 80 | 9 | 99.2 | 0 | 240 | 1 | 278 | 357 | MSR54156.1 aconitate hydratase AcnA [Gemmataceae bacterium] | diamond | 720 | 147 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 22643188 | 22643188 | PRJNA983838_P_NODE_97638_length_264_cov_1.188482_g95271_i0 | PRJNA983838 | 97638 | 264 | 1.188482 | 3.13759248 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 477 | 3.359999999999999e-130 | NTclustered | gi|1554474302|gb|CP025823.1| | 239935 | g95271 | i0 | 99.242 | 91.9810606060606 | 264 | 2 | 100 | 0 | 1 | 264 | 785200 | 784937 | Akkermansia muciniphila strain EB-AMDK-7 chromosome, complete genome | blastn | 24283 | 477 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 27311060 | 27311060 | PRJNA983838_P_NODE_80343_length_299_cov_2.022124_g77976_i0 | PRJNA983838 | 80343 | 299 | 2.022124 | 6.04615076 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 85.9 | 1.48e-18 | NR | HKB90181.1 | 2006848 | g77976 | i0 | 46.5 | 1.0133779264214 | 101 | 51 | 99.3 | 2 | 298 | 2 | 64 | 163 | HKB90181.1 shikimate kinase [Opitutaceae bacterium] | diamond | 303 | 85.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 28706254 | 28706254 | PRJNA983838_P_NODE_90487_length_277_cov_1.348039_g88120_i0 | PRJNA983838 | 90487 | 277 | 1.348039 | 3.73406803 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 162 | 8.04e-47 | NR | MFA6544388.1 | 2052186 | g88120 | i0 | 82.4 | 2.95667870036101 | 91 | 16 | 98.6 | 0 | 275 | 3 | 84 | 174 | MFA6544388.1 sialidase family protein [Limisphaerales bacterium] | diamond | 819 | 163 | 0.993865030674847 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Limisphaerales bacterium | |||
| 29868423 | 29868423 | PRJNA983838_P_NODE_106071_length_252_cov_0.871508_g103704_i0 | PRJNA983838 | 106071 | 252 | 0.871508 | 2.19620016 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 44.3 | 0.012 | NR | MEW5895405.1 | 2035772 | g103704 | i0 | 31.3 | 0.988095238095238 | 83 | 50 | 90.5 | 1 | 238 | 11 | 1043 | 1125 | MEW5895405.1 PAS domain-containing protein [Candidatus Omnitrophota bacterium] | diamond | 249 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 30253784 | 30253784 | PRJNA983838_P_NODE_85772_length_286_cov_2.159624_g83405_i0 | PRJNA983838 | 85772 | 286 | 2.159624 | 6.17652464 | Bacteria | 2 | Bacteria | Bacteria | 111 | 5.880000000000001e-27 | NR | MEM6568911.1 | 2026780 | g83405 | i0 | 54.7 | 14.8216783216783 | 95 | 43 | 99.7 | 0 | 285 | 1 | 211 | 305 | MEM6568911.1 alkene reductase [Planctomycetota bacterium] | diamond | 4239 | 112 | 0.991071428571429 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30437356 | 30437356 | PRJNA983838_P_NODE_100873_length_258_cov_2.108108_g98506_i0 | PRJNA983838 | 100873 | 258 | 2.108108 | 5.43891864 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 146 | 8.879999999999998e-43 | NR | MBU3758371.1 | 2035772 | g98506 | i0 | 98.8 | 0.988372093023256 | 85 | 1 | 98.8 | 0 | 257 | 3 | 50 | 134 | MBU3758371.1 dicarboxylate/amino acid:cation symporter [Candidatus Omnitrophota bacterium] | diamond | 255 | 146 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 30753058 | 30753058 | PRJNA983838_P_NODE_48354_length_443_cov_2.532432_g45988_i0 | PRJNA983838 | 48354 | 443 | 2.532432 | 11.21867376 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 120 | 1.51e-28 | NR | MCP4096080.1 | 2026779 | g45988 | i0 | 46.3 | 0.920993227990971 | 136 | 70 | 90.7 | 3 | 442 | 41 | 366 | 500 | MCP4096080.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 408 | 120 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 31005787 | 31005787 | PRJNA983838_P_NODE_95314_length_268_cov_1.405128_g92947_i0 | PRJNA983838 | 95314 | 268 | 1.405128 | 3.76574304 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.9 | 0.0193 | NR | MBN8643811.1 | 2026780 | g92947 | i0 | 32.3 | 0.694029850746269 | 62 | 40 | 69.4 | 1 | 5 | 190 | 283 | 342 | MBN8643811.1 radical SAM family heme chaperone HemW [Planctomycetota bacterium] | diamond | 186 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31226864 | 31226864 | PRJNA983838_P_NODE_46555_length_457_cov_5.156250_g44189_i0 | PRJNA983838 | 46555 | 457 | 5.15625 | 23.5640625 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 189 | 3.63e-56 | NR | RYD65414.1 | 2026800 | g44189 | i0 | 80.4 | 0.702407002188184 | 107 | 21 | 70.2 | 0 | 2 | 322 | 230 | 336 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 321 | 189 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32080999 | 32080999 | PRJNA983838_P_NODE_40178_length_517_cov_2.558559_g37817_i0 | PRJNA983838 | 40178 | 517 | 2.558559 | 13.22775003 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 256 | 2.62e-82 | NR | RYD81270.1 | 2026800 | g37817 | i0 | 71 | 0.940038684719536 | 162 | 47 | 94 | 0 | 511 | 26 | 177 | 338 | RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium] | diamond | 486 | 256 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32176211 | 32176211 | PRJNA983838_P_NODE_99898_length_260_cov_1.443850_g97531_i0 | PRJNA983838 | 99898 | 260 | 1.44385 | 3.75401 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 137 | 2.46e-35 | NR | RYD24189.1 | 2026800 | g97531 | i0 | 75.9 | 2.00769230769231 | 87 | 20 | 99.2 | 1 | 259 | 2 | 457 | 543 | RYD24189.1 MAG: hypothetical protein EOP88_01205 [Verrucomicrobiaceae bacterium] | diamond | 522 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32334487 | 32334487 | PRJNA983838_P_NODE_72799_length_321_cov_3.346774_g70432_i0 | PRJNA983838 | 72799 | 321 | 3.346774 | 10.74314454 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 145 | 3.749999999999999e-40 | NR | RYD65414.1 | 2026800 | g70432 | i0 | 71 | 1 | 107 | 29 | 100 | 1 | 321 | 1 | 135 | 239 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 321 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32460884 | 32460884 | PRJNA983838_P_NODE_56779_length_388_cov_2.434921_g54412_i0 | PRJNA983838 | 56779 | 388 | 2.434921 | 9.44749348 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 139 | 4.87e-37 | NR | RYD71398.1 | 2026800 | g54412 | i0 | 56.8 | 0.966494845360825 | 125 | 53 | 95.9 | 1 | 15 | 386 | 234 | 358 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 375 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32681392 | 32681392 | PRJNA983838_P_NODE_119460_length_241_cov_2.363095_g117093_i0 | PRJNA983838 | 119460 | 241 | 2.363095 | 5.69505895 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 47 | 0.00111 | NR | HMN94906.1 | 2052180 | g117093 | i0 | 41.2 | 0.634854771784232 | 51 | 29 | 62.2 | 1 | 66 | 215 | 13 | 63 | HMN94906.1 ABC transporter permease [Phycisphaerales bacterium] | diamond | 153 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 32713097 | 32713097 | PRJNA983838_P_NODE_70420_length_329_cov_4.214844_g68053_i0 | PRJNA983838 | 70420 | 329 | 4.214844 | 13.86683676 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 94 | 3.9e-20 | NR | RYD71398.1 | 2026800 | g68053 | i0 | 48.3 | 0.811550151975684 | 89 | 46 | 81.2 | 0 | 15 | 281 | 105 | 193 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 267 | 94 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;