RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA983838", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA983838 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27000487 27000487 PRJNA983838_P_NODE_112582_length_246_cov_3.549133_g110215_i0 PRJNA983838 112582 246 3.549133 8.73086718 Opisthokonta 33154 Cnidaria other_Eukaryota 113 1.87e-29   NR XP_065060436.1 499914 g110215 i0 69.1 14.4146341463415 81 24 98.8 1 243 1 82 161 XP_065060436.1 large ribosomal subunit protein uL22 [Rhopilema esculentum] diamond 3546 114 0.991228070175439 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
29489323 29489323 PRJNA983838_P_NODE_102150_length_256_cov_1.704918_g99783_i0 PRJNA983838 102150 256 1.704918 4.36459008 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 68.2 3.78e-11   NR XP_057293703.1 13093 g99783 i0 54.2 0.69140625 59 27 69.1 0 179 3 8 66 XP_057293703.1 crystallin J1A-like [Hydractinia symbiolongicarpus] diamond 177 68.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
29589863 29589863 PRJNA983838_P_NODE_77210_length_308_cov_1.327660_g74843_i0 PRJNA983838 77210 308 1.32766 4.0891928 Metazoa 33208 Cnidaria other_Eukaryota 58.5 2.04e-7   NR KAK2548031.1 6130 g74843 i0 50.9 2.66883116883117 57 27 55.5 1 136 306 3 58 KAK2548031.1 hypothetical protein P5673_031859 [Acropora cervicornis] diamond 822 58.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora cervicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;