RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA983838", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 1 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 1 ✖

bioproject 1

  • PRJNA983838 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13719453 13719453 PRJNA983838_P_NODE_83691_length_291_cov_1.197248_g81324_i0 PRJNA983838 83691 291 1.197248 3.48399168 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 52.8 0.027   NTclustered gi|2893358441|emb|OZ220733.1| 2053570 g81324 i0 100 0.0962199312714777 28 0 10 0 184 211 2478416 2478443 MAG: Candidatus Latescibacterota bacterium isolate cc6a1995-d657-4e87-88a0-a2308bb9e8e7 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;