contig_metadata
43 rows where bioproject = "PRJNA982720" and tax_kingdom = "Pseudomonadati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 964211 | 964211 | PRJNA982720_S_NODE_1501_length_398_cov_4.944615_g1473_i0 | PRJNA982720 | 1501 | 398 | 4.944615 | 19.6795677 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 684 | 0 | NTclustered | gi|2263174463|gb|CP099645.1| | 134537 | g1473 | i0 | 99.732 | 248.603015075377 | 373 | 1 | 94 | 0 | 26 | 398 | 2243549 | 2243177 | Paraburkholderia fungorum strain OTU2SAUBB1 chromosome 2, complete sequence | blastn | 98944 | 684 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 4792283 | 4792283 | PRJNA982720_S_NODE_1244_length_412_cov_3.418879_g1216_i0 | PRJNA982720 | 1244 | 412 | 3.418879 | 14.08578148 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 756 | 0 | NTclustered | gi|780553163|gb|CP010026.1| | 134537 | g1216 | i0 | 99.757 | 78.2864077669903 | 412 | 1 | 100 | 0 | 1 | 412 | 3709040 | 3709451 | Paraburkholderia fungorum strain ATCC BAA-463 chromosome 1, complete sequence | blastn | 32254 | 756 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 4792313 | 4792313 | PRJNA982720_S_NODE_2144_length_371_cov_2.932886_g2116_i0 | PRJNA982720 | 2144 | 371 | 2.932886 | 10.88100706 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 673 | 0 | NTclustered | gi|2261094427|gb|CP099627.1| | 134537 | g2116 | i0 | 99.728 | 11.0377358490566 | 367 | 1 | 99 | 0 | 5 | 371 | 2253818 | 2254184 | Paraburkholderia fungorum strain OTU2BAGNBA2 chromosome 1, complete sequence | blastn | 4095 | 673 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 4792332 | 4792332 | PRJNA982720_S_NODE_2764_length_351_cov_2.226619_g2736_i0 | PRJNA982720 | 2764 | 351 | 2.226619 | 7.81543269 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 586 | 7.349999999999997e-163 | NTclustered | gi|780553163|gb|CP010026.1| | 134537 | g2736 | i0 | 98.784 | 92.8233618233618 | 329 | 4 | 94 | 0 | 23 | 351 | 11521 | 11849 | Paraburkholderia fungorum strain ATCC BAA-463 chromosome 1, complete sequence | blastn | 32581 | 586 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 7342030 | 7342030 | PRJNA982720_S_NODE_1806_length_384_cov_3.299035_g1778_i0 | PRJNA982720 | 1806 | 384 | 3.299035 | 12.6682944 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 686 | 0 | NTclustered | gi|2739558560|gb|CP157346.1| | 134537 | g1778 | i0 | 99.733 | 97.1927083333333 | 374 | 1 | 97 | 0 | 1 | 374 | 631897 | 631524 | Paraburkholderia fungorum strain zafu-N9 chromosome 1, complete sequence | blastn | 37322 | 686 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 8617374 | 8617374 | PRJNA982720_S_NODE_5207_length_300_cov_4.735683_g5179_i0 | PRJNA982720 | 5207 | 300 | 4.735683 | 14.207049 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 555 | 1.7399999999999995e-153 | NTclustered | gi|1865493873|gb|CP028830.1| | 134537 | g5179 | i0 | 100 | 99.5366666666667 | 300 | 0 | 100 | 0 | 1 | 300 | 435503 | 435802 | Paraburkholderia fungorum strain UM_TBK chromosome 2 | blastn | 29861 | 555 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 9892320 | 9892320 | PRJNA982720_S_NODE_10468_length_223_cov_5.286667_g10440_i0 | PRJNA982720 | 10468 | 223 | 5.286667 | 11.78926741 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 412 | 7.88e-111 | NTclustered | gi|780553163|gb|CP010026.1| | 134537 | g10440 | i0 | 100 | 11.627802690583 | 223 | 0 | 100 | 0 | 1 | 223 | 2678713 | 2678935 | Paraburkholderia fungorum strain ATCC BAA-463 chromosome 1, complete sequence | blastn | 2593 | 412 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 11167674 | 11167674 | PRJNA982720_S_NODE_3169_length_340_cov_4.385768_g3141_i0 | PRJNA982720 | 3169 | 340 | 4.385768 | 14.9116112 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 628 | 1.1699999999999999e-175 | NTclustered | gi|1865490366|gb|CP028829.1| | 134537 | g3141 | i0 | 100 | 98.3970588235294 | 340 | 0 | 100 | 0 | 1 | 340 | 2732922 | 2733261 | Paraburkholderia fungorum strain UM_TBK chromosome 1 | blastn | 33455 | 628 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 12443507 | 12443507 | PRJNA982720_S_NODE_5210_length_300_cov_3.850220_g5182_i0 | PRJNA982720 | 5210 | 300 | 3.85022 | 11.55066 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 542 | 1.36e-149 | NTclustered | gi|780553163|gb|CP010026.1| | 134537 | g5182 | i0 | 99.331 | 24.4733333333333 | 299 | 2 | 99 | 0 | 2 | 300 | 4254485 | 4254187 | Paraburkholderia fungorum strain ATCC BAA-463 chromosome 1, complete sequence | blastn | 7342 | 542 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 12750565 | 12750565 | PRJNA982720_S_NODE_8250_length_257_cov_0.902174_g8222_i0 | PRJNA982720 | 8250 | 257 | 0.902174 | 2.31858718 | Pseudoalteromonas sp. CO1 | 53249 | Bacteria | Bacteria | 114 | 8.4e-31 | NR | WP_205990978.1 | 1777235 | g8222 | i0 | 95 | 0.700389105058366 | 60 | 3 | 70 | 0 | 211 | 32 | 33 | 92 | WP_205990978.1 hypothetical protein, partial [Pseudoalteromonas sp. CO109Y] | diamond | 180 | 114 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Pseudoalteromonadaceae | Pseudoalteromonas | Pseudoalteromonas sp. CO109Y | ||
| 14992396 | 14992396 | PRJNA982720_S_NODE_9432_length_244_cov_1.707602_g9404_i0 | PRJNA982720 | 9432 | 244 | 1.707602 | 4.16654888 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2261094427|gb|CP099627.1| | 134537 | g9404 | i0 | 100 | 96.5040983606557 | 244 | 0 | 100 | 0 | 1 | 244 | 3839996 | 3840239 | Paraburkholderia fungorum strain OTU2BAGNBA2 chromosome 1, complete sequence | blastn | 23547 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 17542227 | 17542227 | PRJNA982720_S_NODE_5014_length_303_cov_6.817391_g4986_i0 | PRJNA982720 | 5014 | 303 | 6.817391 | 20.65669473 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 560 | 3.79e-155 | NTclustered | gi|1865493873|gb|CP028830.1| | 134537 | g4986 | i0 | 100 | 9.98679867986799 | 303 | 0 | 100 | 0 | 1 | 303 | 3308538 | 3308236 | Paraburkholderia fungorum strain UM_TBK chromosome 2 | blastn | 3026 | 560 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 17542254 | 17542254 | PRJNA982720_S_NODE_5794_length_290_cov_7.705069_g5766_i0 | PRJNA982720 | 5794 | 290 | 7.705069 | 22.3447001 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 531 | 2.83e-146 | NTclustered | gi|2739566769|gb|CP157349.1| | 134537 | g5766 | i0 | 100 | 6.04827586206897 | 287 | 0 | 99 | 0 | 1 | 287 | 295421 | 295707 | Paraburkholderia fungorum strain zafu-N9 plasmid unnamed2, complete sequence | blastn | 1754 | 531 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 18816123 | 18816123 | PRJNA982720_S_NODE_5995_length_287_cov_3.140187_g5967_i0 | PRJNA982720 | 5995 | 287 | 3.140187 | 9.01233669 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 531 | 2.799999999999999e-146 | NTclustered | gi|2261094427|gb|CP099627.1| | 134537 | g5967 | i0 | 100 | 31.9477351916376 | 287 | 0 | 100 | 0 | 1 | 287 | 847763 | 847477 | Paraburkholderia fungorum strain OTU2BAGNBA2 chromosome 1, complete sequence | blastn | 9169 | 531 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 20090692 | 20090692 | PRJNA982720_S_NODE_1136_length_420_cov_5.293948_g1108_i0 | PRJNA982720 | 1136 | 420 | 5.293948 | 22.2345816 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|1865490366|gb|CP028829.1| | 134537 | g1108 | i0 | 100 | 19.5785714285714 | 420 | 0 | 100 | 0 | 1 | 420 | 2761864 | 2761445 | Paraburkholderia fungorum strain UM_TBK chromosome 1 | blastn | 8223 | 776 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 20090716 | 20090716 | PRJNA982720_S_NODE_1756_length_386_cov_4.233227_g1728_i0 | PRJNA982720 | 1756 | 386 | 4.233227 | 16.34025622 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|1865490366|gb|CP028829.1| | 134537 | g1728 | i0 | 100 | 97.7046632124352 | 382 | 0 | 99 | 0 | 5 | 386 | 2008693 | 2008312 | Paraburkholderia fungorum strain UM_TBK chromosome 1 | blastn | 37714 | 706 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 20090799 | 20090799 | PRJNA982720_S_NODE_4116_length_320_cov_4.165992_g4088_i0 | PRJNA982720 | 4116 | 320 | 4.165992 | 13.3311744 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 592 | 1.4299999999999996e-164 | NTclustered | gi|1865493873|gb|CP028830.1| | 134537 | g4088 | i0 | 100 | 14.3375 | 320 | 0 | 100 | 0 | 1 | 320 | 99080 | 99399 | Paraburkholderia fungorum strain UM_TBK chromosome 2 | blastn | 4588 | 592 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 20090818 | 20090818 | PRJNA982720_S_NODE_4656_length_310_cov_1.502110_g4628_i0 | PRJNA982720 | 4656 | 310 | 1.50211 | 4.656541 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 527 | 3.9499999999999986e-145 | NTclustered | gi|2261094427|gb|CP099627.1| | 134537 | g4628 | i0 | 100 | 44.441935483871 | 285 | 0 | 92 | 0 | 26 | 310 | 1202398 | 1202682 | Paraburkholderia fungorum strain OTU2BAGNBA2 chromosome 1, complete sequence | blastn | 13777 | 527 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 20090868 | 20090868 | PRJNA982720_S_NODE_6316_length_282_cov_4.416268_g6288_i0 | PRJNA982720 | 6316 | 282 | 4.416268 | 12.45387576 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 521 | 1.6499999999999996e-143 | NTclustered | gi|2739566769|gb|CP157349.1| | 134537 | g6288 | i0 | 100 | 6 | 282 | 0 | 100 | 0 | 1 | 282 | 220741 | 221022 | Paraburkholderia fungorum strain zafu-N9 plasmid unnamed2, complete sequence | blastn | 1692 | 521 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 21366317 | 21366317 | PRJNA982720_S_NODE_1957_length_378_cov_7.531148_g1929_i0 | PRJNA982720 | 1957 | 378 | 7.531148 | 28.46773944 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 699 | 0 | NTclustered | gi|1865490366|gb|CP028829.1| | 134537 | g1929 | i0 | 100 | 100.047619047619 | 378 | 0 | 100 | 0 | 1 | 378 | 2635684 | 2636061 | Paraburkholderia fungorum strain UM_TBK chromosome 1 | blastn | 37818 | 699 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 23917050 | 23917050 | PRJNA982720_S_NODE_7939_length_260_cov_3.679144_g7911_i0 | PRJNA982720 | 7939 | 260 | 3.679144 | 9.5657744 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 479 | 9.17e-131 | NTclustered | gi|2739558560|gb|CP157346.1| | 134537 | g7911 | i0 | 100 | 99.5076923076923 | 259 | 0 | 99 | 0 | 2 | 260 | 2086842 | 2086584 | Paraburkholderia fungorum strain zafu-N9 chromosome 1, complete sequence | blastn | 25872 | 479 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 25190443 | 25190443 | PRJNA982720_S_NODE_1760_length_386_cov_3.607029_g1732_i0 | PRJNA982720 | 1760 | 386 | 3.607029 | 13.92313194 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 713 | 0 | NTclustered | gi|1865490366|gb|CP028829.1| | 134537 | g1732 | i0 | 100 | 98.5647668393782 | 386 | 0 | 100 | 0 | 1 | 386 | 1993798 | 1994183 | Paraburkholderia fungorum strain UM_TBK chromosome 1 | blastn | 38046 | 713 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 25190590 | 25190590 | PRJNA982720_S_NODE_6120_length_285_cov_3.750000_g6092_i0 | PRJNA982720 | 6120 | 285 | 3.75 | 10.6875 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 527 | 3.59e-145 | NTclustered | gi|2263177777|gb|CP099647.1| | 134537 | g6092 | i0 | 100 | 50.4315789473684 | 285 | 0 | 100 | 0 | 1 | 285 | 2186750 | 2186466 | Paraburkholderia fungorum strain OTU2SAUBB1 chromosome 1, complete sequence | blastn | 14373 | 527 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 25190672 | 25190672 | PRJNA982720_S_NODE_8500_length_254_cov_1.243094_g8472_i0 | PRJNA982720 | 8500 | 254 | 1.243094 | 3.15745876 | Paraburkholderia phytofirmans | 261302 | Bacteria | Bacteria | 176 | 1.31e-39 | NTclustered | gi|187720305|gb|CP001054.1| | 398527 | g8472 | i0 | 87.919 | 1.77952755905512 | 149 | 18 | 74 | 0 | 1 | 149 | 41788 | 41640 | Paraburkholderia phytofirmans PsJN plasmid pBPHYT01, complete sequence | blastn | 452 | 176 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia phytofirmans | ||
| 27215772 | 27215772 | PRJNA982720_S_NODE_7242_length_270_cov_0.842640_g7214_i0 | PRJNA982720 | 7242 | 270 | 0.84264 | 2.275128 | Helicobacter pylori | 210 | Bacteria | Bacteria | 74.7 | 5.83e-15 | NR | GAA6899797.1 | 210 | g7214 | i0 | 60.9 | 0.711111111111111 | 64 | 25 | 71.1 | 0 | 233 | 42 | 54 | 117 | GAA6899797.1 hypothetical protein Kyoto207A_1280 [Helicobacter pylori] | diamond | 192 | 74.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27215773 | 27215773 | PRJNA982720_S_NODE_8782_length_251_cov_0.977528_g8754_i0 | PRJNA982720 | 8782 | 251 | 0.977528 | 2.45359528 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 62 | 1.74e-10 | NR | WP_305200423.1 | 573 | g8754 | i0 | 62.2 | 0.537848605577689 | 45 | 17 | 53.8 | 0 | 73 | 207 | 5 | 49 | WP_305200423.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 135 | 62 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 27531895 | 27531895 | PRJNA982720_S_NODE_1323_length_408_cov_1.328358_g1295_i0 | PRJNA982720 | 1323 | 408 | 1.328358 | 5.41970064 | Helicobacter pylori | 210 | Bacteria | Bacteria | 154 | 1.95e-44 | NR | GAB0054170.1 | 210 | g1295 | i0 | 60.4 | 12.8235294117647 | 134 | 53 | 98.5 | 0 | 408 | 7 | 65 | 198 | GAB0054170.1 hypothetical protein YGH029_14930 [Helicobacter pylori] | diamond | 5232 | 155 | 0.993548387096774 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27816269 | 27816269 | PRJNA982720_S_NODE_1924_length_380_cov_0.801303_g1896_i0 | PRJNA982720 | 1924 | 380 | 0.801303 | 3.0449514 | Helicobacter pylori | 210 | Bacteria | Bacteria | 55.8 | 3.84e-7 | NR | GAA9037147.1 | 210 | g1896 | i0 | 54.9 | 1.20789473684211 | 51 | 23 | 40.3 | 0 | 194 | 42 | 3 | 53 | GAA9037147.1 hypothetical protein Kyoto184A_00210 [Helicobacter pylori] | diamond | 459 | 55.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27816270 | 27816270 | PRJNA982720_S_NODE_4884_length_306_cov_0.768240_g4856_i0 | PRJNA982720 | 4884 | 306 | 0.76824 | 2.3508144 | Myroides odoratimimus | 76832 | Bacteria | Bacteria | 60.5 | 6.91e-10 | NR | WP_286394671.1 | 76832 | g4856 | i0 | 55.1 | 0.480392156862745 | 49 | 22 | 48 | 0 | 214 | 68 | 3 | 51 | WP_286394671.1 hypothetical protein [Myroides odoratimimus] | diamond | 147 | 60.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Myroides | Myroides odoratimimus | |
| 28295562 | 28295562 | PRJNA982720_S_NODE_7306_length_269_cov_1.015306_g7278_i0 | PRJNA982720 | 7306 | 269 | 1.015306 | 2.73117314 | root | 1 | Root_unresolved | Root_unresolved | 68.6 | 3.63e-13 | NR | CUV48234.1 | 305 | g7278 | i0 | 68 | 2.23048327137546 | 50 | 16 | 55.8 | 0 | 178 | 29 | 11 | 60 | CUV48234.1 protein of unknown function [Ralstonia solanacearum] | diamond | 600 | 68.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 29363262 | 29363262 | PRJNA982720_S_NODE_8889_length_250_cov_0.802260_g8861_i0 | PRJNA982720 | 8889 | 250 | 0.80226 | 2.00565 | Helicobacter pylori | 210 | Bacteria | Bacteria | 68.6 | 4.44e-12 | NR | GAA9246112.1 | 210 | g8861 | i0 | 63.9 | 1.464 | 61 | 22 | 73.2 | 0 | 201 | 19 | 87 | 147 | GAA9246112.1 hypothetical protein Kyoto199A_0240 [Helicobacter pylori] | diamond | 366 | 68.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29463498 | 29463498 | PRJNA982720_S_NODE_3290_length_338_cov_1.079245_g3262_i0 | PRJNA982720 | 3290 | 338 | 1.079245 | 3.6478481 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 43.5 | 0.00384 | NR | GAA6864469.1 | 210 | g3262 | i0 | 46.2 | 0.701183431952663 | 39 | 21 | 34.6 | 0 | 143 | 259 | 5 | 43 | GAA6864469.1 hypothetical protein Kyoto206A_2160 [Helicobacter pylori] | diamond | 237 | 43.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30215752 | 30215752 | PRJNA982720_S_NODE_3832_length_326_cov_1.169960_g3804_i0 | PRJNA982720 | 3832 | 326 | 1.1699600000000001 | 3.8140696 | Helicobacter pylori | 210 | Bacteria | Bacteria | 49.3 | 1.71e-5 | NR | GAA9260229.1 | 210 | g3804 | i0 | 64.9 | 0.340490797546012 | 37 | 13 | 34 | 0 | 162 | 272 | 1 | 37 | GAA9260229.1 hypothetical protein Kyoto199A_4440 [Helicobacter pylori] | diamond | 111 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31163498 | 31163498 | PRJNA982720_S_NODE_6835_length_275_cov_1.044554_g6807_i0 | PRJNA982720 | 6835 | 275 | 1.044554 | 2.8725235 | Rhizobium laguerreae | 1076926 | Bacteria | Bacteria | 55.1 | 8.21e-8 | NR | WP_204347672.1 | 1076926 | g6807 | i0 | 65.9 | 0.447272727272727 | 41 | 14 | 44.7 | 0 | 125 | 247 | 20 | 60 | WP_204347672.1 hypothetical protein, partial [Rhizobium laguerreae] | diamond | 123 | 55.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium laguerreae | ||
| 31194964 | 31194964 | PRJNA982720_S_NODE_8415_length_255_cov_1.159341_g8387_i0 | PRJNA982720 | 8415 | 255 | 1.159341 | 2.95631955 | Helicobacter pylori | 210 | Bacteria | Bacteria | 52 | 8.31e-6 | NR | GAA9038119.1 | 210 | g8387 | i0 | 66.7 | 0.847058823529412 | 36 | 12 | 42.4 | 0 | 32 | 139 | 1 | 36 | GAA9038119.1 hypothetical protein Kyoto184A_01030 [Helicobacter pylori] | diamond | 216 | 52 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31226859 | 31226859 | PRJNA982720_S_NODE_9655_length_243_cov_0.858824_g9627_i0 | PRJNA982720 | 9655 | 243 | 0.858824 | 2.08694232 | Helicobacter pylori | 210 | Bacteria | Bacteria | 80.5 | 4.27e-17 | NR | GAA8684133.1 | 210 | g9627 | i0 | 53.8 | 1.97530864197531 | 80 | 37 | 98.8 | 0 | 242 | 3 | 32 | 111 | GAA8684133.1 hypothetical protein Kyoto145A_0980 [Helicobacter pylori] | diamond | 480 | 80.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31258613 | 31258613 | PRJNA982720_S_NODE_5415_length_297_cov_0.924107_g5387_i0 | PRJNA982720 | 5415 | 297 | 0.924107 | 2.74459779 | Helicobacter pylori | 210 | Bacteria | Bacteria | 48.9 | 2.31e-5 | NR | GAA9126255.1 | 210 | g5387 | i0 | 77.1 | 0.353535353535354 | 35 | 8 | 35.4 | 0 | 150 | 254 | 20 | 54 | GAA9126255.1 hypothetical protein Kyoto190A_1160 [Helicobacter pylori] | diamond | 105 | 48.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31258614 | 31258614 | PRJNA982720_S_NODE_9375_length_245_cov_0.883721_g9347_i0 | PRJNA982720 | 9375 | 245 | 0.883721 | 2.16511645 | Stutzerimonas stutzeri | 316 | Bacteria | Bacteria | 86.3 | 5.27e-20 | NR | WP_219853451.1 | 316 | g9347 | i0 | 72.7 | 0.673469387755102 | 55 | 15 | 67.3 | 0 | 1 | 165 | 2 | 56 | WP_219853451.1 hypothetical protein, partial [Stutzerimonas stutzeri] | diamond | 165 | 86.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Stutzerimonas | Stutzerimonas stutzeri | ||
| 31701421 | 31701421 | PRJNA982720_S_NODE_4157_length_320_cov_0.878543_g4129_i0 | PRJNA982720 | 4157 | 320 | 0.878543 | 2.8113376 | Enterobacter hormaechei | 158836 | Bacteria | Bacteria | 89.4 | 5.53e-21 | NR | WP_251276324.1 | 158836 | g4129 | i0 | 63.8 | 0.646875 | 69 | 25 | 64.7 | 0 | 209 | 3 | 2 | 70 | WP_251276324.1 hypothetical protein, partial [Enterobacter hormaechei] | diamond | 207 | 89.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter hormaechei | ||
| 31796127 | 31796127 | PRJNA982720_S_NODE_5917_length_289_cov_0.740741_g5889_i0 | PRJNA982720 | 5917 | 289 | 0.740741 | 2.14074149 | Helicobacter pylori | 210 | Bacteria | Bacteria | 53.1 | 4.89e-7 | NR | GAA9255403.1 | 210 | g5889 | i0 | 49.1 | 0.570934256055363 | 55 | 27 | 57.1 | 1 | 42 | 206 | 1 | 54 | GAA9255403.1 hypothetical protein Kyoto199A_3310 [Helicobacter pylori] | diamond | 165 | 53.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32239529 | 32239529 | PRJNA982720_S_NODE_5738_length_291_cov_3.270642_g5710_i0 | PRJNA982720 | 5738 | 291 | 3.270642 | 9.51756822 | Candidatus Magnetomorum sp. HK-1 | 1509431 | Bacteria | Bacteria | 42.7 | 0.0448 | NR | KPA18979.1 | 1509431 | g5710 | i0 | 55.6 | 0.927835051546392 | 90 | 23 | 78.4 | 6 | 55 | 282 | 1 | 87 | KPA18979.1 conserved hypothetical protein, secreted, partial [Candidatus Magnetomorum sp. HK-1] | diamond | 270 | 42.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Candidatus Magnetomoraceae | Candidatus Magnetomorum | Candidatus Magnetomorum sp. HK-1 | ||
| 32372021 | 32372021 | PRJNA982720_S_NODE_6239_length_284_cov_0.810427_g6211_i0 | PRJNA982720 | 6239 | 284 | 0.810427 | 2.30161268 | Bacteria | 2 | Bacteria | Bacteria | 41.6 | 0.0169 | NR | WP_254995941.1 | 470 | g6211 | i0 | 61.3 | 1.10915492957746 | 31 | 12 | 32.7 | 0 | 209 | 117 | 25 | 55 | WP_254995941.1 hypothetical protein, partial [Acinetobacter baumannii] | diamond | 315 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 32429198 | 32429198 | PRJNA982720_S_NODE_7919_length_261_cov_1.095745_g7891_i0 | PRJNA982720 | 7919 | 261 | 1.095745 | 2.85989445 | Helicobacter pylori | 210 | Bacteria | Bacteria | 66.2 | 2.13e-12 | NR | GAA9125607.1 | 210 | g7891 | i0 | 73.8 | 0.482758620689655 | 42 | 11 | 48.3 | 0 | 7 | 132 | 8 | 49 | GAA9125607.1 hypothetical protein Kyoto190A_0930 [Helicobacter pylori] | diamond | 126 | 66.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;