RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA982106", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA982106 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16573812 16573812 PRJNA982106_P_NODE_9453_length_332_cov_2.154440_g9213_i0 PRJNA982106 9453 332 2.15444 7.1527408 Thermoproteati 1783275 Archaea Archaea 601 2.4799999999999996e-167   NTclustered gi|428675553|gb|JX889077.1| 29281 g9213 i0 99.396 99.0903614457831 331 2 99 0 1 331 331 1 Uncultured crenarchaeote clone J4 ammonia monooxygenase subunit A (amoA) gene, partial cds blastn 32898 601 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
31606527 31606527 PRJNA982106_P_NODE_21616_length_250_cov_0.870056_g21376_i0 PRJNA982106 21616 250 0.870056 2.17514 Thermoproteota archaeon 2056631 Archaea Archaea 65.5 6.12e-12   NR MDQ6668694.1 2056631 g21376 i0 82.1 0.936 39 7 46.8 0 133 249 4 42 MDQ6668694.1 hypothetical protein [Thermoproteota archaeon] diamond 234 65.5 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;