RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA982106" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA982106 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4792052 4792052 PRJNA982106_P_NODE_30564_length_242_cov_2.278107_g30324_i0 PRJNA982106 30564 242 2.278107 5.51301894 Gigantopelta aegis 1735272 Mollusca Mollusca 136 2.03e-38   NR XP_041360936.1 1735272 g30324 i0 83.1 6.73140495867769 77 13 95.5 0 12 242 1 77 XP_041360936.1 40S ribosomal protein S8-like [Gigantopelta aegis] diamond 1629 136 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
9891757 9891757 PRJNA982106_P_NODE_13148_length_298_cov_0.866667_g12908_i0 PRJNA982106 13148 298 0.866667 2.58266766 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.008   NTclustered gi|2912988862|dbj|AP039593.1| 145626 g12908 i0 100 0.0973154362416107 29 0 10 0 78 106 62492766 62492794 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 12, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
30443205 30443205 PRJNA982106_P_NODE_25993_length_246_cov_1.462428_g25753_i0 PRJNA982106 25993 246 1.462428 3.59757288 Metazoa 33208 Mollusca Mollusca 112 1.19e-26   NR XP_046380465.1 6454 g25753 i0 74.7 237.80487804878 75 19 91.5 0 236 12 638 712 XP_046380465.1 SWI/SNF complex subunit SMARCC2-like isoform X5 [Haliotis rufescens] diamond 58500 112 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
30500283 30500283 PRJNA982106_P_NODE_19153_length_258_cov_1.664865_g18913_i0 PRJNA982106 19153 258 1.664865 4.2953517 Physella acuta 109671 Mollusca Mollusca 47.8 7.83e-4   NR XP_059165578.1 109671 g18913 i0 48.7 1.7093023255814 39 20 45.3 0 137 253 333 371 XP_059165578.1 stabilin-2-like [Physella acuta] diamond 441 47.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;