RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA982106" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA982106 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13717279 13717279 PRJNA982106_P_NODE_12611_length_302_cov_1.117904_g12371_i0 PRJNA982106 12611 302 1.117904 3.37607008 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 184 3.1499999999999998e-52   NR XP_002732853.1 10224 g12371 i0 82 3.97350993377483 100 18 99.3 0 301 2 404 503 XP_002732853.1 PREDICTED: 1,4-alpha-glucan-branching enzyme-like [Saccoglossus kowalevskii] diamond 1200 184 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;