RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA982106", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA982106 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26614589 26614589 PRJNA982106_P_NODE_20781_length_251_cov_0.865169_g20541_i0 PRJNA982106 20781 251 0.865169 2.17157419 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 133 3.1499999999999997e-37   NR HXM95754.1 2052315 g20541 i0 82.9 0.9800796812749 82 14 98 0 3 248 6 87 HXM95754.1 recombinase family protein [Candidatus Dormiibacterota bacterium] diamond 246 133 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29047540 29047540 PRJNA982106_P_NODE_25868_length_247_cov_0.885057_g25628_i0 PRJNA982106 25868 247 0.885057 2.18609079 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 149 4.43e-44   NR HSS16753.1 2052315 g25628 i0 87.7 2.95141700404858 81 10 98.4 0 245 3 63 143 HSS16753.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 729 149 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30279461 30279461 PRJNA982106_P_NODE_27212_length_245_cov_1.343023_g26972_i0 PRJNA982106 27212 245 1.343023 3.29040635 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 144 2.1199999999999998e-42   NR HSS15813.1 2052315 g26972 i0 77.8 0.991836734693878 81 18 99.2 0 243 1 18 98 HSS15813.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 243 144 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32813556 32813556 PRJNA982106_P_NODE_24600_length_248_cov_0.880000_g24360_i0 PRJNA982106 24600 248 0.88 2.1824 PVC group 1783257 Bacteria Bacteria 145 4.13e-38   NR HSS18198.1 2052315 g24360 i0 90.2 1.98387096774194 82 8 99.2 0 248 3 861 942 HSS18198.1 alanine--tRNA ligase [Candidatus Dormiibacterota bacterium] diamond 492 145 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;