RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA982106", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA982106 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27910521 27910521 PRJNA982106_P_NODE_32065_length_241_cov_0.916667_g31825_i0 PRJNA982106 32065 241 0.916667 2.20916747 Phaeodactylum tricornutum CCAP 1 2850 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0271   NR XP_002185372.1 556484 g31825 i0 30.1 0.908713692946058 73 47 90.9 2 10 228 583 651 XP_002185372.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1] diamond 219 43.1 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
31827768 31827768 PRJNA982106_P_NODE_30977_length_242_cov_0.911243_g30737_i0 PRJNA982106 30977 242 0.911243 2.20520806 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 50.8 4.99e-5   NR KAG7351563.1 303405 g30737 i0 40 0.805785123966942 65 39 80.6 0 235 41 333 397 KAG7351563.1 sulfotransferase family protein [Nitzschia inconspicua] diamond 195 50.8 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;