RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA982106", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA982106 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2239127 2239127 PRJNA982106_P_NODE_22302_length_250_cov_0.870056_g22062_i0 PRJNA982106 22302 250 0.870056 2.17514 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 156 1.49e-42   NR HVJ04841.1 2973664 g22062 i0 92.7 0.984 82 6 98.4 0 3 248 20 101 HVJ04841.1 ferrous iron transport protein B [Candidatus Saccharimonadales bacterium] diamond 246 156 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30247727 30247727 PRJNA982106_P_NODE_31372_length_242_cov_0.911243_g31132_i0 PRJNA982106 31372 242 0.911243 2.20520806 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 107 1.39e-25   NR HSX78167.1 2890869 g31132 i0 80 0.991735537190083 80 16 99.2 0 240 1 29 108 HSX78167.1 SIS domain-containing protein [Candidatus Saccharimonadia bacterium] diamond 240 107 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
30405903 30405903 PRJNA982106_P_NODE_27813_length_245_cov_0.895349_g27573_i0 PRJNA982106 27813 245 0.895349 2.19360505 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 94.4 4.99e-22   NR MEI7918250.1 2026720 g27573 i0 58.8 0.979591836734694 80 33 98 0 1 240 3 82 MEI7918250.1 HAD family phosphatase [Candidatus Saccharibacteria bacterium] diamond 240 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31922815 31922815 PRJNA982106_P_NODE_25037_length_247_cov_0.885057_g24797_i0 PRJNA982106 25037 247 0.885057 2.18609079 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 142 2.84e-41   NR HSX76985.1 2890869 g24797 i0 97.1 0.825910931174089 68 2 82.6 0 205 2 1 68 HSX76985.1 3-isopropylmalate dehydratase small subunit [Candidatus Saccharimonadia bacterium] diamond 204 142 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
31985993 31985993 PRJNA982106_P_NODE_20578_length_251_cov_0.865169_g20338_i0 PRJNA982106 20578 251 0.865169 2.17157419 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 68.6 3.12e-12   NR HPQ82233.1 1917697 g20338 i0 94.4 0.430278884462151 36 2 43 0 109 2 1 36 HPQ82233.1 DNA recombination/repair protein RecA [Candidatus Saccharimonas sp.] diamond 108 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;