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contig_metadata

22 rows where bioproject = "PRJNA981359" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 22 ✖

bioproject 1

  • PRJNA981359 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
963171 963171 PRJNA981359_S_NODE_62841_length_256_cov_1.092896_g62741_i0 PRJNA981359 62841 256 1.092896 2.79781376 Caudoviricetes sp. 2832643 Viruses Viruses 63.9 1.08e-5   NTclustered gi|2914862149|gb|OR222161.1| 2832643 g62741 i0 100 13.60546875 34 0 13 0 223 256 42 9 MAG: Caudoviricetes sp. isolate MSP0819 genomic sequence blastn 3483 63.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
7340119 7340119 PRJNA981359_S_NODE_32466_length_321_cov_1.411290_g32366_i0 PRJNA981359 32466 321 1.41129 4.5302409 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g32366 i0 100 0.180685358255452 30 0 9 0 292 321 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
7340860 7340860 PRJNA981359_S_NODE_59066_length_263_cov_1.231579_g58966_i0 PRJNA981359 59066 263 1.231579 3.23905277 Caudoviricetes sp. 2832643 Viruses Viruses 71.3 6.63e-8   NTclustered gi|2914781615|gb|OR222342.1| 2832643 g58966 i0 97.561 15.532319391635 41 1 16 0 221 261 52286 52326 MAG: Caudoviricetes sp. isolate MSP1062 genomic sequence blastn 4085 71.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
8615837 8615837 PRJNA981359_S_NODE_53367_length_274_cov_1.164179_g53267_i0 PRJNA981359 53367 274 1.164179 3.18985046 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g53267 i0 96.97 0.529197080291971 33 1 12 0 242 274 45 13 Carnation latent virus isolate KL, complete genome blastn 145 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
11165265 11165265 PRJNA981359_S_NODE_17609_length_371_cov_1.308725_g17509_i0 PRJNA981359 17609 371 1.308725 4.85536975 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.01   NTclustered gi|1995060321|gb|MN450069.1| 12164 g17509 i0 100 0.380053908355795 29 0 8 0 343 371 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
11474530 11474530 PRJNA981359_S_NODE_35909_length_312_cov_2.284519_g35809_i0 PRJNA981359 35909 312 2.284519 7.12769928 Mimivirus 315393 Viruses Viruses 52.8 0.029   NTclustered gi|2206266719|gb|OL770070.1| 212035 g35809 i0 100 0.358974358974359 28 0 9 0 44 71 387181 387154 Acanthamoeba polyphaga mimivirus, partial genome blastn 112 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus bradfordmassiliense
13716826 13716826 PRJNA981359_S_NODE_63751_length_254_cov_1.403315_g63651_i0 PRJNA981359 63751 254 1.403315 3.5644201 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g63651 i0 100 0.224409448818898 29 0 11 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
14991099 14991099 PRJNA981359_S_NODE_64352_length_253_cov_1.300000_g64252_i0 PRJNA981359 64352 253 1.3 3.289 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g64252 i0 96.97 0.241106719367589 33 0 13 1 1 33 13 44 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 61 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
16264807 16264807 PRJNA981359_S_NODE_19033_length_364_cov_3.082474_g18933_i0 PRJNA981359 19033 364 3.082474 11.22020536 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.035   NTclustered gi|2057093854|tpg|BK038175.1| 2832643 g18933 i0 100 0.0769230769230769 28 0 8 0 48 75 1003 1030 MAG TPA_asm: Caudoviricetes sp. isolate ctpaM1, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20089680 20089680 PRJNA981359_S_NODE_64576_length_253_cov_0.866667_g64476_i0 PRJNA981359 64576 253 0.866667 2.19266751 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.002   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g64476 i0 90.698 0.505928853754941 43 3 17 1 1 42 56 98 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 128 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
21673156 21673156 PRJNA981359_S_NODE_56477_length_268_cov_1.071795_g56377_i0 PRJNA981359 56477 268 1.071795 2.8724106 Viruses 10239 Viruses Viruses 52.8 0.025   NTclustered gi|1844585427|gb|MN534311.1| 1477405 g56377 i0 96.875 0.238805970149254 32 0 12 1 208 239 375688 375658 Faustovirus strain liban, complete genome blastn 64 52.8 1 Viruses               Faustovirus
22639538 22639538 PRJNA981359_S_NODE_38158_length_306_cov_4.034335_g38058_i0 PRJNA981359 38158 306 4.034335 12.3450651 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.008   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g38058 i0 100 0.186274509803922 29 0 9 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
22640150 22640150 PRJNA981359_S_NODE_60618_length_260_cov_1.374332_g60518_i0 PRJNA981359 60618 260 1.374332 3.5732632 Human endogenous retrovirus K 45617 Viruses Viruses 54.3 3.91e-6   NR CAA76882.1 45617 g60518 i0 61.4 5.58461538461538 44 17 50.8 0 128 259 571 614 CAA76882.1 pol protein [Human endogenous retrovirus K] diamond 1452 54.3 1 Viruses Human endogenous retroviruses Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Human endogenous retrovirus K
22640183 22640183 PRJNA981359_S_NODE_61678_length_258_cov_1.264865_g61578_i0 PRJNA981359 61678 258 1.264865 3.2633517 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.007   NTclustered gi|1995060321|gb|MN450069.1| 12164 g61578 i0 100 0.546511627906977 29 0 11 0 230 258 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
22640456 22640456 PRJNA981359_S_NODE_70998_length_245_cov_0.906977_g70898_i0 PRJNA981359 70998 245 0.906977 2.22209365 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g70898 i0 100 0.23265306122449 29 0 12 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
25189745 25189745 PRJNA981359_S_NODE_8680_length_433_cov_6.066667_g8580_i0 PRJNA981359 8680 433 6.066667 26.26866811 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.003   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g8580 i0 100 0.265588914549654 30 0 7 0 1 30 56 85 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
27279253 27279253 PRJNA981359_S_NODE_46163_length_289_cov_0.842593_g46063_i0 PRJNA981359 46163 289 0.842593 2.43509377 Human endogenous retrovirus K 45617 Viruses Viruses 88.6 2.64e-19   NR ABA28250.1 45617 g46063 i0 52.9 5.26297577854671 85 40 88.2 0 257 3 101 185 ABA28250.1 protease, partial [Human endogenous retrovirus K] diamond 1521 88.6 1 Viruses Human endogenous retroviruses Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Human endogenous retrovirus K
28037155 28037155 PRJNA981359_S_NODE_20425_length_359_cov_0.727273_g20325_i0 PRJNA981359 20425 359 0.727273 2.61091007 HERV-H/env6 57282 Viruses Viruses 78.6 3.8e-14   NR CAB94193.2 129526 g20325 i0 43.7 0.994428969359331 119 67 99.4 0 357 1 366 484 CAB94193.2 envelope protein [HERV-H/env60] diamond 357 78.6 1 Viruses Human endogenous retroviruses Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Human endogenous retrovirus H
29300022 29300022 PRJNA981359_S_NODE_70229_length_246_cov_0.867052_g70129_i0 PRJNA981359 70229 246 0.867052 2.13294792 Human endogenous retrovirus K 45617 Viruses Viruses 75.5 1.01e-13   NR CAA71418.1 45617 g70129 i0 66.7 7.68292682926829 63 21 76.8 0 206 18 224 286 CAA71418.1 gag protein, partial [Human endogenous retrovirus K] diamond 1890 75.5 1 Viruses Human endogenous retroviruses Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Human endogenous retrovirus K
29773469 29773469 PRJNA981359_S_NODE_671_length_866_cov_4.627995_g619_i0 PRJNA981359 671 866 4.627995 40.0784367 Gammaretrovirus murleu 3428959 Viruses Viruses 588 5.609999999999998e-209   NR 8WUS_E 11801 g619 i0 98.3 5.98614318706697 288 5 99.8 0 3 866 61 348 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 5184 588 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
30057779 30057779 PRJNA981359_S_NODE_58631_length_264_cov_0.816754_g58531_i0 PRJNA981359 58631 264 0.816754 2.15623056 Human endogenous retrovirus HCML-ARV 228277 Viruses Viruses 90.5 7.99e-19   NR AAP06677.1 228277 g58531 i0 59.7 2.61363636363636 77 31 87.5 0 264 34 25 101 AAP06677.1 pol protein [Human endogenous retrovirus HCML-ARV] diamond 690 91.3 0.991237677984666 Viruses Human endogenous retroviruses Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Human endogenous retrovirus
30152438 30152438 PRJNA981359_S_NODE_1592_length_691_cov_7.595469_g1508_i0 PRJNA981359 1592 691 7.595469 52.48469079 Moloney murine leukemia virus 11801 Viruses Viruses 446 5.51e-142   NR NP_057933.2 11801 g1508 i0 97 3.99421128798842 230 7 99.9 0 2 691 1082 1311 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 2760 446 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;