RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA981359" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA981359 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26804697 26804697 PRJNA981359_S_NODE_74461_length_237_cov_5.079268_g74361_i0 PRJNA981359 74461 237 5.079268 12.03786516 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.4 0.0455   NR NOX57190.1 2026780 g74361 i0 38.1 0.531645569620253 42 25 51.9 1 50 172 53 94 NOX57190.1 rhomboid family intramembrane serine protease [Planctomycetota bacterium] diamond 126 42.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28984540 28984540 PRJNA981359_S_NODE_25828_length_340_cov_1.505618_g25728_i0 PRJNA981359 25828 340 1.505618 5.1191012 Phycisphaerae bacterium 2026778 Bacteria Bacteria 44.3 0.0272   NR HUT56262.1 2026778 g25728 i0 39.2 0.45 51 31 45 0 108 260 161 211 HUT56262.1 MBL fold metallo-hydrolase [Phycisphaerae bacterium] diamond 153 44.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
32776022 32776022 PRJNA981359_S_NODE_38860_length_305_cov_1.681034_g38760_i0 PRJNA981359 38860 305 1.681034 5.1271537 Pirellulales bacterium 2715253 Bacteria Bacteria 43.9 0.028   NR MBN2580312.1 2715253 g38760 i0 34.2 0.718032786885246 73 43 66.9 1 91 294 221 293 MBN2580312.1 phosphatidate cytidylyltransferase [Pirellulales bacterium] diamond 219 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;