RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA981359", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA981359 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8615837 8615837 PRJNA981359_S_NODE_53367_length_274_cov_1.164179_g53267_i0 PRJNA981359 53367 274 1.164179 3.18985046 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g53267 i0 96.97 0.529197080291971 33 1 12 0 242 274 45 13 Carnation latent virus isolate KL, complete genome blastn 145 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
11165265 11165265 PRJNA981359_S_NODE_17609_length_371_cov_1.308725_g17509_i0 PRJNA981359 17609 371 1.308725 4.85536975 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.01   NTclustered gi|1995060321|gb|MN450069.1| 12164 g17509 i0 100 0.380053908355795 29 0 8 0 343 371 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
13716826 13716826 PRJNA981359_S_NODE_63751_length_254_cov_1.403315_g63651_i0 PRJNA981359 63751 254 1.403315 3.5644201 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g63651 i0 100 0.224409448818898 29 0 11 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
22640183 22640183 PRJNA981359_S_NODE_61678_length_258_cov_1.264865_g61578_i0 PRJNA981359 61678 258 1.264865 3.2633517 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.007   NTclustered gi|1995060321|gb|MN450069.1| 12164 g61578 i0 100 0.546511627906977 29 0 11 0 230 258 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;