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contig_metadata

8 rows where bioproject = "PRJNA981359" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA981359 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4790486 4790486 PRJNA981359_S_NODE_37804_length_307_cov_3.461538_g37704_i0 PRJNA981359 37804 307 3.461538 10.62692166 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|1620175562|ref|XM_028683273.1| 880535 g37704 i0 100 0.0944625407166124 29 0 9 0 146 174 1691 1663 Plasmodium sp. gorilla clade G2 vacuolar transporter chaperone,putative (PADL01_1230800), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
17539997 17539997 PRJNA981359_S_NODE_2614_length_600_cov_3.062619_g2517_i0 PRJNA981359 2614 600 3.062619 18.375714 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.005   NTclustered gi|1620139151|ref|XM_028675269.1| 85471 g2517 i0 96.97 0.055 33 1 6 0 266 298 1543 1575 Plasmodium relictum clp1-related protein, putative (PRELSG_0502300), partial mRNA blastn 33 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
17540529 17540529 PRJNA981359_S_NODE_44774_length_292_cov_1.068493_g44674_i0 PRJNA981359 44774 292 1.068493 3.11999956 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.027   NTclustered gi|2742502725|gb|PP905714.1| 447216 g44674 i0 100 0.311643835616438 28 0 10 0 265 292 1225 1198 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 91 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
17540693 17540693 PRJNA981359_S_NODE_49874_length_281_cov_1.500000_g49774_i0 PRJNA981359 49874 281 1.5 4.215 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|1843423069|dbj|LC541880.1| 5823 g49774 i0 100 0.099644128113879 28 0 10 0 109 136 8087 8060 Plasmodium berghei ANKA chromosome 1 telomere region, partial sequence blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
18814373 18814373 PRJNA981359_S_NODE_42415_length_297_cov_1.178571_g42315_i0 PRJNA981359 42415 297 1.178571 3.50035587 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g42315 i0 100 0.191919191919192 29 0 10 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
23915956 23915956 PRJNA981359_S_NODE_69039_length_247_cov_1.385057_g68939_i0 PRJNA981359 69039 247 1.385057 3.42109079 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2742502725|gb|PP905714.1| 447216 g68939 i0 100 0.242914979757085 30 0 12 0 1 30 1198 1227 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 60 56.5 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
30658215 30658215 PRJNA981359_S_NODE_52493_length_275_cov_5.767327_g52393_i0 PRJNA981359 52493 275 5.767327 15.86014925 Fragilariopsis cylindrus CCMP11 186039 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00703   NR OEU08163.1 635003 g52393 i0 48.7 0.425454545454545 39 20 42.5 0 104 220 68 106 OEU08163.1 hypothetical protein FRACYDRAFT_250392 [Fragilariopsis cylindrus CCMP1102] diamond 117 44.7 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Fragilariopsis Fragilariopsis cylindrus
30879321 30879321 PRJNA981359_S_NODE_11494_length_406_cov_34.321321_g11394_i0 PRJNA981359 11494 406 34.321321 139.34456326 Chrysophaeum taylorii 2483200 SAR_Eukaryotes SAR_Eukaryotes 69.3 1.05e-10   NR KAJ8601885.1 2483200 g11394 i0 64.3 0.820197044334975 56 20 41.4 0 338 171 419 474 KAJ8601885.1 hypothetical protein CTAYLR_002641 [Chrysophaeum taylorii] diamond 333 69.3 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Chrysophaeum Chrysophaeum taylorii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;