RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA980839" and tax_phylum = "Preplasmiviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980839 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1270158 1270158 PRJNA980839_P_NODE_187521_length_257_cov_2.016304_g183737_i0 PRJNA980839 187521 257 2.016304 5.18190128 root 1 Root_unresolved Root_unresolved 438 1.5399999999999995e-118   NTclustered gi|2288721861|gb|OP218818.1| 10535 g183737 i0 99.583 94.3112840466926 240 1 93 0 1 240 2281 2042 Unidentified adenovirus strain CHOP Ad5 blastn 24238 438 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
24222128 24222128 PRJNA980839_P_NODE_46699_length_642_cov_2.298770_g42985_i0 PRJNA980839 46699 642 2.29877 14.7581034 root 1 Root_unresolved Root_unresolved 701 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g42985 i0 100 100.093457943925 379 0 100 0 1 379 3130 3508 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 64260 701 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
30152392 30152392 PRJNA980839_P_NODE_225352_length_244_cov_0.900585_g221568_i0 PRJNA980839 225352 244 0.900585 2.1974274 Adintovirus anguilla10665 3115889 Viruses Viruses 102 1.03e-24   NR DBA49780.1 3115889 g221568 i0 68.3 0.774590163934426 63 20 77.5 0 1 189 184 246 DBA49780.1 MAG TPA_asm: Penton [Adintovirus anguilla10665] diamond 189 102 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;