RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980839", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980839 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12438752 12438752 PRJNA980839_P_NODE_4370_length_3040_cov_3.045838_g3655_i0 PRJNA980839 4370 3040 3.045838 92.5934752 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1011 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g3655 i0 96.266 0.547039473684211 616 23 54 0 1 616 24 639 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 1663 1011 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
17537265 17537265 PRJNA980839_P_NODE_2494_length_3760_cov_6.553295_g2047_i0 PRJNA980839 2494 3760 6.553295 246.403892 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2327 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g2047 i0 91.983 0.769148936170213 1659 129 77 4 2104 3760 5329 6985 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 2892 2327 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;