RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA980839" and tax_kingdom = "Thermoproteati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 4 ✖

bioproject 1

  • PRJNA980839 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2234187 2234187 PRJNA980839_P_NODE_222482_length_245_cov_0.895349_g218698_i0 PRJNA980839 222482 245 0.895349 2.19360505 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 171 2.96e-51   NR HLN34464.1 2169593 g218698 i0 100 0.991836734693878 81 0 99.2 0 245 3 89 169 HLN34464.1 sulfurtransferase [Nitrososphaeraceae archaeon] diamond 243 171 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
7334495 7334495 PRJNA980839_P_NODE_115686_length_331_cov_2.627907_g111902_i0 PRJNA980839 115686 331 2.627907 8.69837217 Candidatus Nitrosotenuis aquarius 1846278 Archaea Archaea 586 6.91e-163   NTclustered gi|1279207014|gb|CP024808.1| 1846278 g111902 i0 98.784 66.2326283987915 329 4 99 0 3 331 291218 290890 Candidatus Nitrosotenuis aquarius strain AQ6F chromosome, complete genome blastn 21923 586 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis aquarius
28731697 28731697 PRJNA980839_P_NODE_233747_length_242_cov_0.911243_g229963_i0 PRJNA980839 233747 242 0.911243 2.20520806 Nitrososphaerota archaeon 2026795 Archaea Archaea 154 1.53e-45   NR MDE1844052.1 2026795 g229963 i0 97.5 0.991735537190083 80 2 99.2 0 240 1 23 102 MDE1844052.1 hypothetical protein [Nitrososphaerota archaeon] diamond 240 154 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31644000 31644000 PRJNA980839_P_NODE_80596_length_419_cov_2.179191_g76812_i0 PRJNA980839 80596 419 2.179191 9.13081029 Candidatus Nitrosotenuis 1825023 Archaea Archaea 167 4.2e-49   NR WP_148550859.1 1603555 g76812 i0 82.3 1.44630071599045 96 17 68.7 0 290 3 85 180 WP_148550859.1 hypothetical protein [Candidatus Nitrosotenuis cloacae] diamond 606 167 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;