RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980839", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA980839 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28984498 28984498 PRJNA980839_P_NODE_218508_length_246_cov_0.890173_g214724_i0 PRJNA980839 218508 246 0.890173 2.18982558 Diadema antillarum 105358 Echinodermata other_Eukaryota 42.7 0.0387   NR XP_071493817.1 105358 g214724 i0 42.9 0.682926829268293 56 29 64.6 1 30 188 771 826 XP_071493817.1 uncharacterized protein [Diadema antillarum] diamond 168 42.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
32555929 32555929 PRJNA980839_P_NODE_238959_length_241_cov_0.916667_g235175_i0 PRJNA980839 238959 241 0.916667 2.20916747 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 97.8 4.8599999999999996e-23   NR PIK53896.1 307972 g235175 i0 86 0.622406639004149 50 7 62.2 0 205 56 109 158 PIK53896.1 alanyl-tRNA synthetase [Apostichopus japonicus] diamond 150 97.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;