RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980839", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA980839 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26677770 26677770 PRJNA980839_P_NODE_185161_length_259_cov_1.500000_g181377_i0 PRJNA980839 185161 259 1.5 3.885 Smittium angustum 133377 Fungi Fungi 51.2 4.76e-5   NR PWA01886.1 133377 g181377 i0 49.1 1.2046332046332 55 27 62.5 1 2 163 241 295 PWA01886.1 hypothetical protein BB558_002016 [Smittium angustum] diamond 312 51.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium angustum
32524254 32524254 PRJNA980839_P_NODE_159139_length_279_cov_1.495146_g155355_i0 PRJNA980839 159139 279 1.495146 4.17145734 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 68.9 2.59e-11   NR ORX86026.1 1314790 g155355 i0 68 0.537634408602151 50 16 53.8 0 129 278 67 116 ORX86026.1 RNA-binding domain-containing protein [Basidiobolus meristosporus CBS 931.73] diamond 150 68.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;