RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA980839", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA980839 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27879172 27879172 PRJNA980839_P_NODE_82025_length_414_cov_1.354839_g78241_i0 PRJNA980839 82025 414 1.354839 5.60903346 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 169 1.29e-51   NR HTX52751.1 2952909 g78241 i0 82 0.72463768115942 100 18 72.5 0 107 406 1 100 HTX52751.1 transposase [Candidatus Baltobacteraceae bacterium] diamond 300 169 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
28232234 28232234 PRJNA980839_P_NODE_182466_length_261_cov_1.409574_g178682_i0 PRJNA980839 182466 261 1.409574 3.67898814 Bacillati 1783272 Bacteria Bacteria 147 4.37e-39   NR HTA58053.1 2952909 g178682 i0 83.9 5 87 14 100 0 261 1 241 327 HTA58053.1 ABC transporter ATP-binding protein [Candidatus Baltobacteraceae bacterium] diamond 1305 148 0.993243243243243 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
29931715 29931715 PRJNA980839_P_NODE_76451_length_436_cov_1.272727_g72667_i0 PRJNA980839 76451 436 1.272727 5.54908972 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 112 1.8e-29   NR HEV3155873.1 2952909 g72667 i0 56.5 0.584862385321101 85 37 58.5 0 267 13 1 85 HEV3155873.1 hypothetical protein [Candidatus Baltobacteraceae bacterium] diamond 255 112 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;