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contig_metadata

6 rows where bioproject = "PRJNA980839", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA980839 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4786040 4786040 PRJNA980839_P_NODE_169764_length_270_cov_2.553299_g165980_i0 PRJNA980839 169764 270 2.553299 6.8939073 Nolandia orientalis 1607835 SAR_Eukaryotes SAR_Eukaryotes 425 1.27e-114   NTclustered gi|759083538|gb|KM222155.1| 1607835 g165980 i0 95.167 99.9925925925926 269 13 99 0 1 269 888 620 Nolandia orientalis voucher PXM2010102401 large subunit ribosomal RNA gene, partial sequence blastn 26998 425 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida Colepidae Nolandia Nolandia orientalis
17537673 17537673 PRJNA980839_P_NODE_49494_length_611_cov_3.661710_g45759_i0 PRJNA980839 49494 611 3.66171 22.3730481 Coleps hirtus 60000 SAR_Eukaryotes SAR_Eukaryotes 1066 0   NTclustered gi|328684911|gb|HM122027.1| 394492 g45759 i0 98.2 65.9230769230769 611 9 100 1 1 611 623 15 Coleps hirtus hirtus isolate SNK09101903 macronuclear blastn 40279 1066 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida Colepidae Coleps Coleps hirtus
21672111 21672111 PRJNA980839_P_NODE_119597_length_325_cov_1.833333_g115813_i0 PRJNA980839 119597 325 1.833333 5.95833225 Coleps 6003 SAR_Eukaryotes SAR_Eukaryotes 601 2.4199999999999993e-167   NTclustered gi|1825575437|gb|MT253687.1| 60000 g115813 i0 100 99.4953846153846 325 0 100 0 1 325 28 352 Coleps hirtus strain CCAP 1613/14 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 32336 601 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida Colepidae Coleps Coleps hirtus
25183763 25183763 PRJNA980839_P_NODE_158520_length_280_cov_1.077295_g154736_i0 PRJNA980839 158520 280 1.077295 3.016426 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|2643439136|emb|OX456574.1| 1481888 g154736 i0 100 0.1 28 0 10 0 142 169 16674 16701 Blepharisma stoltei strain ATCC30299 genome assembly, organelle: mitochondrion blastn 28 52.8 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
28485141 28485141 PRJNA980839_P_NODE_225186_length_244_cov_0.900585_g221402_i0 PRJNA980839 225186 244 0.900585 2.1974274 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.2 1.36e-7   NR OMJ66985.1 5963 g221402 i0 79.4 2.92622950819672 34 7 41.8 0 239 138 298 331 OMJ66985.1 hypothetical protein SteCoe_35983 [Stentor coeruleus] diamond 714 58.5 0.994871794871795 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
28769185 28769185 PRJNA980839_P_NODE_205467_length_249_cov_0.875000_g201683_i0 PRJNA980839 205467 249 0.875 2.17875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.1 1.5e-6   NR CDW72625.1 5949 g201683 i0 38.3 2.67469879518072 81 48 97.6 1 245 3 185 263 CDW72625.1 UNKNOWN [Stylonychia lemnae] diamond 666 55.5 0.992792792792793 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;