RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980839", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA980839 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26804672 26804672 PRJNA980839_P_NODE_72601_length_453_cov_1.013158_g68817_i0 PRJNA980839 72601 453 1.013158 4.58960574 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 122 1.83e-31   NR MBI2093451.1 2035772 g68817 i0 48.4 3.21854304635762 122 54 74.8 1 340 2 8 129 MBI2093451.1 NYN domain-containing protein [Candidatus Omnitrophota bacterium] diamond 1458 122 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30247687 30247687 PRJNA980839_P_NODE_243732_length_232_cov_2.421384_g239948_i0 PRJNA980839 243732 232 2.421384 5.61761088 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 113 5.3200000000000006e-27   NR NUP92167.1 2035772 g239948 i0 67.1 0.982758620689655 76 25 98.3 0 4 231 116 191 NUP92167.1 S8 family serine peptidase [Candidatus Omnitrophota bacterium] diamond 228 113 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;