RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA980839", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 12 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 12 ✖

bioproject 1

  • PRJNA980839 · 12 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27095491 27095491 PRJNA980839_P_NODE_214602_length_247_cov_0.885057_g210818_i0 PRJNA980839 214602 247 0.885057 2.18609079 Adineta 104781 Rotifera other_Eukaryota 127 1.4799999999999998e-32   NR UJR24592.1 104782 g210818 i0 97.1 5.78137651821862 68 2 82.6 0 205 2 108 175 UJR24592.1 hypothetical protein I4U23_005967 [Adineta vaga] diamond 1428 128 0.9921875 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
27879133 27879133 PRJNA980839_P_NODE_192225_length_254_cov_1.640884_g188441_i0 PRJNA980839 192225 254 1.640884 4.16784536 Rotaria socialis 392032 Rotifera other_Eukaryota 65.5 4.12e-10   NR CAF3609291.1 392032 g188441 i0 63.5 1.81889763779528 52 18 60.2 1 6 158 262 313 CAF3609291.1 unnamed protein product [Rotaria socialis] diamond 462 65.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
29242919 29242919 PRJNA980839_P_NODE_178169_length_264_cov_1.549738_g174385_i0 PRJNA980839 178169 264 1.549738 4.0913083200000004 Rotaria 231623 Rotifera other_Eukaryota 68.9 2.93e-11   NR CAF1061203.1 392030 g174385 i0 57.6 6.75 66 19 75 1 1 198 268 324 CAF1061203.1 unnamed protein product [Rotaria magnacalcarata] diamond 1782 69.3 0.994227994227994 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29363203 29363203 PRJNA980839_P_NODE_232409_length_242_cov_1.639053_g228625_i0 PRJNA980839 232409 242 1.639053 3.96650826 Adineta vaga 104782 Rotifera other_Eukaryota 80.5 1.89e-15   NR UJR23625.1 104782 g228625 i0 100 0.45867768595041303 37 0 45.9 0 1 111 619 655 UJR23625.1 hypothetical protein I4U23_026611 [Adineta vaga] diamond 111 80.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
29615379 29615379 PRJNA980839_P_NODE_214310_length_247_cov_0.885057_g210526_i0 PRJNA980839 214310 247 0.885057 2.18609079 Adineta vaga 104782 Rotifera other_Eukaryota 80.9 6.28e-16   NR UJR25070.1 104782 g210526 i0 68.4 1.44534412955466 57 18 69.2 0 75 245 161 217 UJR25070.1 hypothetical protein I4U23_006430 [Adineta vaga] diamond 357 80.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
30405816 30405816 PRJNA980839_P_NODE_152233_length_285_cov_1.452830_g148449_i0 PRJNA980839 152233 285 1.45283 4.1405655 Adineta ricciae 249248 Rotifera other_Eukaryota 135 1.07e-35   NR CAF1388660.1 249248 g148449 i0 97 1.38947368421053 66 2 69.5 0 88 285 98 163 CAF1388660.1 unnamed protein product [Adineta ricciae] diamond 396 135 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
30437299 30437299 PRJNA980839_P_NODE_238013_length_241_cov_0.916667_g234229_i0 PRJNA980839 238013 241 0.916667 2.20916747 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 43.5 0.0181   NR CAF4527539.1 2762511 g234229 i0 42.9 1.08298755186722 42 24 52.3 0 233 108 1 42 CAF4527539.1 unnamed protein product [Rotaria sp. Silwood1] diamond 261 43.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
30816119 30816119 PRJNA980839_P_NODE_182554_length_261_cov_1.319149_g178770_i0 PRJNA980839 182554 261 1.319149 3.44297889 Rotaria sordida 392033 Rotifera other_Eukaryota 50.8 6.26e-5   NR CAF1195584.1 392033 g178770 i0 61.3 6.14942528735632 31 12 35.6 0 8 100 66 96 CAF1195584.1 unnamed protein product [Rotaria sordida] diamond 1605 50.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
30847766 30847766 PRJNA980839_P_NODE_207054_length_249_cov_0.875000_g203270_i0 PRJNA980839 207054 249 0.875 2.17875 Adineta ricciae 249248 Rotifera other_Eukaryota 91.7 2.43e-19   NR CAF1039000.1 249248 g203270 i0 95.2 1.01204819277108 42 2 50.6 0 238 113 200 241 CAF1039000.1 unnamed protein product [Adineta ricciae] diamond 252 91.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31106434 31106434 PRJNA980839_P_NODE_123735_length_319_cov_1.126016_g119951_i0 PRJNA980839 123735 319 1.126016 3.59199104 Eurotatoria 2816136 Rotifera other_Eukaryota 64.3 2.57e-9   NR UJR29474.1 104782 g119951 i0 39.6 1.98432601880878 106 51 98.7 3 319 5 410 503 UJR29474.1 hypothetical protein I4U23_010686 [Adineta vaga] diamond 633 64.7 0.993817619783617 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
31575034 31575034 PRJNA980839_P_NODE_232576_length_242_cov_1.473373_g228792_i0 PRJNA980839 232576 242 1.473373 3.56556266 Adineta ricciae 249248 Rotifera other_Eukaryota 42.7 0.0363   NR CAF0928535.1 249248 g228792 i0 53.1 0.793388429752066 32 15 39.7 0 101 6 438 469 CAF0928535.1 unnamed protein product [Adineta ricciae] diamond 192 42.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
32775993 32775993 PRJNA980839_P_NODE_207220_length_249_cov_0.875000_g203436_i0 PRJNA980839 207220 249 0.875 2.17875 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 47.4 9.45e-4   NR CAF3889509.1 392030 g203436 i0 34.3 1.68674698795181 70 41 78.3 2 196 2 182 251 CAF3889509.1 unnamed protein product [Rotaria magnacalcarata] diamond 420 47.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;