RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA980839", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA980839 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28579922 28579922 PRJNA980839_P_NODE_148107_length_289_cov_1.134259_g144323_i0 PRJNA980839 148107 289 1.134259 3.27800851 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 96.7 7.5e-21   NR GCA63320.1 797122 g144323 i0 50 3.82006920415225 92 46 95.5 0 282 7 7 98 GCA63320.1 hypothetical protein KIPB_009248, partial [Kipferlia bialata] diamond 1104 96.7 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
30816106 30816106 PRJNA980839_P_NODE_147034_length_290_cov_1.064516_g143250_i0 PRJNA980839 147034 290 1.064516 3.0870964 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 116 1e-27   NR KAJ5077896.1 1746090 g143250 i0 61.7 10.6965517241379 94 36 97.2 0 290 9 2345 2438 KAJ5077896.1 alpha-actinin-2 [Anaeramoeba ignava] diamond 3102 116 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;