RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA980839", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 7 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA980839 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8609459 8609459 PRJNA980839_P_NODE_108447_length_344_cov_3.140221_g104663_i0 PRJNA980839 108447 344 3.140221 10.80236024 Ignavibacterium sp. 2651167 Bacteria Bacteria 63.9 1.5e-5   NTclustered gi|2108406931|gb|CP070637.1| 2651167 g104663 i0 100 1.46220930232558 34 0 10 0 136 169 1477381 1477348 MAG: Ignavibacterium sp. isolate bin94 chromosome blastn 503 63.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
27506500 27506500 PRJNA980839_P_NODE_243083_length_233_cov_3.268750_g239299_i0 PRJNA980839 243083 233 3.26875 7.6161875 Bacteria 2 Bacteria Bacteria 45.8 0.00261   NR MCB0722430.1 2026749 g239299 i0 32.8 5.3175965665236 67 45 86.3 0 10 210 325 391 MCB0722430.1 ABC transporter ATP-binding protein [Ignavibacteriota bacterium] diamond 1239 46.2 0.991341991341991 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
27690090 27690090 PRJNA980839_P_NODE_234464_length_242_cov_0.911243_g230680_i0 PRJNA980839 234464 242 0.911243 2.20520806 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 163 1.28e-44   NR HOP50712.1 2049428 g230680 i0 98.8 0.991735537190083 80 1 99.2 0 3 242 855 934 HOP50712.1 hypothetical protein [Ignavibacteriales bacterium] diamond 240 163 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
27879127 27879127 PRJNA980839_P_NODE_179305_length_263_cov_1.621053_g175521_i0 PRJNA980839 179305 263 1.621053 4.26336939 Ignavibacteria bacterium 2053306 Bacteria Bacteria 156 6.289999999999998e-42   NR MBI2794146.1 2053306 g175521 i0 98.9 0.992395437262357 87 1 99.2 0 3 263 994 1080 MBI2794146.1 hypothetical protein [Ignavibacteria bacterium] diamond 261 156 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29805106 29805106 PRJNA980839_P_NODE_239631_length_241_cov_0.916667_g235847_i0 PRJNA980839 239631 241 0.916667 2.20916747 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 144 3.579999999999999e-38   NR MEI9975212.1 2026749 g235847 i0 95 0.995850622406639 80 4 99.6 0 240 1 238 317 MEI9975212.1 YjhG/YagF family D-xylonate dehydratase [Ignavibacteriota bacterium] diamond 240 144 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
30089381 30089381 PRJNA980839_P_NODE_180772_length_262_cov_1.629630_g176988_i0 PRJNA980839 180772 262 1.62963 4.2696306 Ignavibacteria bacterium 2053306 Bacteria Bacteria 80.9 1.17e-17   NR MBK7985850.1 2053306 g176988 i0 100 0.458015267175573 40 0 45.8 0 2 121 57 96 MBK7985850.1 RNA-binding protein [Ignavibacteria bacterium] diamond 120 80.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31448378 31448378 PRJNA980839_P_NODE_181676_length_261_cov_2.436170_g177892_i0 PRJNA980839 181676 261 2.43617 6.3584037 Ignavibacteria bacterium 2053306 Bacteria Bacteria 60.5 1.32e-8   NR MBK6760985.1 2053306 g177892 i0 68.3 0.942528735632184 41 13 47.1 0 4 126 57 97 MBK6760985.1 tetratricopeptide repeat protein [Ignavibacteria bacterium] diamond 246 60.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;