RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA980839", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 4 ✖

tax_clade 1

  • Discoba · 4 ✖

bioproject 1

  • PRJNA980839 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18812092 18812092 PRJNA980839_P_NODE_78295_length_428_cov_1.247887_g74511_i0 PRJNA980839 78295 428 1.247887 5.34095636 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 154 2.57e-41   NR YP_007890021.1 5763 g74511 i0 50.7 2.9018691588785 136 67 95.3 0 408 1 48 183 YP_007890021.1 ATP synthase F1 subunit alpha [Naegleria fowleri] diamond 1242 154 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
25182863 25182863 PRJNA980839_P_NODE_114840_length_333_cov_1.480769_g111056_i0 PRJNA980839 114840 333 1.480769 4.93096077 Acrasis kona 1008807 Heterolobosea other_Eukaryota 164 1.0999999999999999e-47   NR KAL0489701.1 1008807 g111056 i0 76.9 0.972972972972973 108 25 97.3 0 332 9 126 233 KAL0489701.1 enoyl-CoA hydratase [Acrasis kona] diamond 324 164 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28857839 28857839 PRJNA980839_P_NODE_222068_length_245_cov_0.895349_g218284_i0 PRJNA980839 222068 245 0.895349 2.19360505 Acrasis kona 1008807 Heterolobosea other_Eukaryota 48.5 2.94e-4   NR KAL0485674.1 1008807 g218284 i0 33.8 0.906122448979592 74 47 90.6 1 243 22 169 240 KAL0485674.1 kelch-like protein [Acrasis kona] diamond 222 48.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31226773 31226773 PRJNA980839_P_NODE_175735_length_266_cov_1.274611_g171951_i0 PRJNA980839 175735 266 1.274611 3.39046526 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 55.1 2.29e-6   NR XP_044546967.1 51637 g171951 i0 36.6 1.04887218045113 93 52 97 2 264 7 460 552 XP_044546967.1 uncharacterized protein C9374_006276 [Naegleria lovaniensis] diamond 279 55.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;