RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980839", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA980839 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30032434 30032434 PRJNA980839_P_NODE_226171_length_244_cov_0.900585_g222387_i0 PRJNA980839 226171 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 129 2.48e-36   NR KKU75624.1 1618749 g222387 i0 80.2 6.02459016393443 81 16 99.6 0 2 244 29 109 KKU75624.1 MAG: MgtC family protein [Candidatus Nomurabacteria bacterium GW2011_GWB1_47_6] diamond 1470 130 0.992307692307692 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWB1_47_6
32901864 32901864 PRJNA980839_P_NODE_219120_length_246_cov_0.890173_g215336_i0 PRJNA980839 219120 246 0.890173 2.18982558 Candidatus Nomurabacteria bacterium GW2 2052152 Bacteria Bacteria 147 1.74e-40   NR KKS99029.1 1618738 g215336 i0 87.7 1.97560975609756 81 10 98.8 0 244 2 100 180 KKS99029.1 MAG: Isomerizing Glutamine-fructose-6-phosphate aminotransferase, partial [Candidatus Nomurabacteria bacterium GW2011_GWA2_43_15] diamond 486 147 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWA2_43_15

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;