contig_metadata
7 rows where bioproject = "PRJNA980587" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25496111 | 25496111 | PRJNA980587_P_NODE_88960_length_245_cov_0.889535_g88167_i0 | PRJNA980587 | 88960 | 245 | 0.889535 | 2.17936075 | Treponema | 157 | Bacteria | Bacteria | 171 | 5.85e-38 | NTclustered | gi|2265141765|gb|CP051199.1| | 2563664 | g88167 | i0 | 79.424 | 5.06938775510204 | 243 | 48 | 99 | 2 | 2 | 243 | 1591012 | 1591253 | Treponema sp. OMZ 788 chromosome, complete genome | blastn | 1242 | 171 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 788 | ||
| 28200704 | 28200704 | PRJNA980587_P_NODE_64126_length_283_cov_1.461905_g63333_i0 | PRJNA980587 | 64126 | 283 | 1.461905 | 4.13719115 | Bacteria | 2 | Bacteria | Bacteria | 58.9 | 9.82e-8 | NR | OJF76583.1 | 1908540 | g63333 | i0 | 35.6 | 1.92932862190813 | 90 | 58 | 95.4 | 0 | 2 | 271 | 173 | 262 | OJF76583.1 MAG: 5'-nucleotidase [Treponema sp. CETP13] | diamond | 546 | 58.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. CETP13 | ||
| 28321064 | 28321064 | PRJNA980587_P_NODE_95346_length_241_cov_0.916667_g94553_i0 | PRJNA980587 | 95346 | 241 | 0.916667 | 2.20916747 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 84 | 8.95e-17 | NR | MBN2161005.1 | 2202144 | g94553 | i0 | 50.7 | 0.933609958506224 | 75 | 37 | 93.4 | 0 | 240 | 16 | 323 | 397 | MBN2161005.1 ATP-binding protein [Spirochaetota bacterium] | diamond | 225 | 84 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28390341 | 28390341 | PRJNA980587_P_NODE_82746_length_248_cov_1.760000_g81953_i0 | PRJNA980587 | 82746 | 248 | 1.76 | 4.3648 | Leptospira | 171 | Bacteria | Bacteria | 81.6 | 7.95e-16 | NR | HMW05084.1 | 2026757 | g81953 | i0 | 50.6 | 4.99596774193548 | 83 | 40 | 99.2 | 1 | 2 | 247 | 580 | 662 | HMW05084.1 putative Ig domain-containing protein [Leptospiraceae bacterium] | diamond | 1239 | 82.4 | 0.990291262135922 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 29678475 | 29678475 | PRJNA980587_P_NODE_91730_length_243_cov_0.905882_g90937_i0 | PRJNA980587 | 91730 | 243 | 0.905882 | 2.20129326 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 43.9 | 0.0123 | NR | TVR03740.1 | 1898206 | g90937 | i0 | 41.3 | 0.925925925925926 | 75 | 34 | 81.5 | 3 | 33 | 230 | 17 | 90 | TVR03740.1 MAG: TVP38/TMEM64 family protein [Spirochaetaceae bacterium] | diamond | 225 | 43.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 30468810 | 30468810 | PRJNA980587_P_NODE_81273_length_249_cov_1.642045_g80480_i0 | PRJNA980587 | 81273 | 249 | 1.642045 | 4.08869205 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 74.7 | 1.85e-13 | NR | NBF38870.1 | 2202144 | g80480 | i0 | 54.2 | 3.02409638554217 | 83 | 30 | 97.6 | 3 | 2 | 244 | 235 | 311 | NBF38870.1 phosphoglycerate kinase [Spirochaetota bacterium] | diamond | 753 | 74.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 31290009 | 31290009 | PRJNA980587_P_NODE_68895_length_272_cov_1.472362_g68102_i0 | PRJNA980587 | 68895 | 272 | 1.472362 | 4.00482464 | Leptospirales bacterium | 2604146 | Bacteria | Bacteria | 56.6 | 5.55e-7 | NR | MBX7059927.1 | 2604146 | g68102 | i0 | 36.9 | 1.64338235294118 | 84 | 53 | 92.6 | 0 | 271 | 20 | 200 | 283 | MBX7059927.1 ankyrin repeat domain-containing protein [Leptospirales bacterium] | diamond | 447 | 56.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospirales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;