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contig_metadata

13 rows where bioproject = "PRJNA980587" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980587 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1269551 1269551 PRJNA980587_P_NODE_54141_length_311_cov_1.731092_g53348_i0 PRJNA980587 54141 311 1.731092 5.38369612 Mesomycoplasma 2923352 Bacteria Bacteria 566 8.389999999999998e-157   NTclustered gi|1450419971|emb|LS991950.1| 2100 g53348 i0 99.676 17.5337620578778 309 1 99 0 1 309 643482 643174 Mycoplasma hyorhinis strain NCTC10130 genome assembly, chromosome: 1 blastn 5453 566 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
2231636 2231636 PRJNA980587_P_NODE_88962_length_245_cov_0.889535_g88169_i0 PRJNA980587 88962 245 0.889535 2.17936075 Mycoplasma yeatsii 51365 Bacteria Bacteria 414 2.45e-111   NTclustered gi|756767228|gb|CP007520.1| 743967 g88169 i0 97.531 46.4979591836735 243 4 99 2 1 242 673555 673796 Mycoplasma yeatsii GM274B blastn 11392 414 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma yeatsii
3505884 3505884 PRJNA980587_P_NODE_15483_length_669_cov_1.906040_g14719_i0 PRJNA980587 15483 669 1.90604 12.7514076 Mycoplasma cottewii 51364 Bacteria Bacteria 1090 0   NTclustered gi|2294785939|gb|CP103424.1| 51364 g14719 i0 96.114 2 669 25 100 1 1 669 48031 47364 Mycoplasma cottewii strain VIS chromosome, complete genome blastn 1338 1090 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma cottewii
5097853 5097853 PRJNA980587_P_NODE_48024_length_332_cov_3.482625_g47231_i0 PRJNA980587 48024 332 3.482625 11.562315 Mesomycoplasma 2923352 Bacteria Bacteria 608 1.479999999999999e-169   NTclustered gi|1720621726|gb|CP035041.1| 2100 g47231 i0 100 15.8704819277108 329 0 99 0 4 332 644093 643765 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 5269 608 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
12748788 12748788 PRJNA980587_P_NODE_68210_length_274_cov_0.975124_g67417_i0 PRJNA980587 68210 274 0.975124 2.67183976 Mesomycoplasma 2923352 Bacteria Bacteria 501 2.08e-137   NTclustered gi|1720621726|gb|CP035041.1| 2100 g67417 i0 99.635 15 274 1 100 0 1 274 818296 818023 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 4110 501 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
14023420 14023420 PRJNA980587_P_NODE_75011_length_258_cov_1.664865_g74218_i0 PRJNA980587 75011 258 1.664865 4.2953517 Mesomycoplasma 2923352 Bacteria Bacteria 475 1.1799999999999999e-129   NTclustered gi|1720621726|gb|CP035041.1| 2100 g74218 i0 100 14.9418604651163 257 0 99 0 1 257 355629 355373 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3855 475 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
15297406 15297406 PRJNA980587_P_NODE_34592_length_403_cov_2.430303_g33799_i0 PRJNA980587 34592 403 2.430303 9.79412109 Mollicutes 31969 Bacteria Bacteria 739 0   NTclustered gi|171703046|dbj|AB353273.1| 2121 g33799 i0 99.752 109.975186104218 403 1 100 0 1 403 1474 1072 Mycoplasma orale gene for 16S ribosomal RNA, partial sequence blastn 44320 745 0.991946308724832 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Metamycoplasma Metamycoplasma orale
15297504 15297504 PRJNA980587_P_NODE_79032_length_251_cov_0.865169_g78239_i0 PRJNA980587 79032 251 0.865169 2.17157419 Mesomycoplasma 2923352 Bacteria Bacteria 462 8.869999999999999e-126   NTclustered gi|1720621726|gb|CP035041.1| 2100 g78239 i0 100 14.9402390438247 250 0 99 0 2 251 590803 590554 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3750 462 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
16258619 16258619 PRJNA980587_P_NODE_49573_length_327_cov_1.196850_g48780_i0 PRJNA980587 49573 327 1.19685 3.9136995 Metamycoplasma orale 2121 Bacteria Bacteria 599 8.759999999999997e-167   NTclustered gi|1563679895|emb|LR214940.1| 2121 g48780 i0 99.694 151.229357798165 327 1 100 0 1 327 698384 698710 Mycoplasma orale strain NCTC10112 genome assembly, chromosome: 1 blastn 49452 599 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Metamycoplasma Metamycoplasma orale
25182506 25182506 PRJNA980587_P_NODE_93700_length_242_cov_0.911243_g92907_i0 PRJNA980587 93700 242 0.911243 2.20520806 Mycoplasma cottewii 51364 Bacteria Bacteria 364 2.4699999999999992e-96   NTclustered gi|2294785939|gb|CP103424.1| 51364 g92907 i0 93.802 1 242 15 100 0 1 242 869462 869703 Mycoplasma cottewii strain VIS chromosome, complete genome blastn 242 364 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma cottewii
31574970 31574970 PRJNA980587_P_NODE_80436_length_250_cov_0.870056_g79643_i0 PRJNA980587 80436 250 0.870056 2.17514 Mycoplasma capricolum 2095 Bacteria Bacteria 46.2 1.81e-4   NR WP_271237167.1 2095 g79643 i0 45.6 0.684 57 19 54 1 159 25 1 57 WP_271237167.1 BspA family leucine-rich repeat surface protein [Mycoplasma capricolum] diamond 171 46.2 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma capricolum
31764554 31764554 PRJNA980587_P_NODE_32517_length_419_cov_1.488439_g31724_i0 PRJNA980587 32517 419 1.488439 6.23655941 Anaeroplasma bactoclasticum 2088 Bacteria Bacteria 72.4 2.75e-13   NR WP_119015321.1 2088 g31724 i0 40.6 1.43914081145585 96 50 63.7 1 358 92 6 101 WP_119015321.1 YccF domain-containing protein [Anaeroplasma bactoclasticum] diamond 603 72.4 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Anaeroplasmatales Anaeroplasmataceae Anaeroplasma Anaeroplasma bactoclasticum
32112652 32112652 PRJNA980587_P_NODE_22738_length_526_cov_0.966887_g21947_i0 PRJNA980587 22738 526 0.966887 5.08582562 Candidatus Izimaplasma bacterium N/A Bacteria Bacteria 55.1 1.58e-5   NR MCF7923713.1 2315156 g21947 i0 38.2 0.433460076045627 76 42 43.3 2 456 229 154 224 MCF7923713.1 glycoside hydrolase family 16 protein [Candidatus Izimaplasma bacterium] diamond 228 55.1 1 Bacteria   Bacillati Mycoplasmatota Candidatus Izimaplasma       Candidatus Izimaplasma bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;