contig_metadata
5 rows where bioproject = "PRJNA980587" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1269479 | 1269479 | PRJNA980587_P_NODE_1181_length_2355_cov_10.026731_g1047_i0 | PRJNA980587 | 1181 | 2355 | 10.026731 | 236.12951505 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 214 | 1.73e-58 | NR | MBN9378867.1 | 2047757 | g1047 | i0 | 30.8 | 0.608917197452229 | 478 | 206 | 60 | 8 | 535 | 1947 | 3 | 362 | MBN9378867.1 type III polyketide synthase [Chlamydiales bacterium] | diamond | 1434 | 214 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 26899733 | 26899733 | PRJNA980587_P_NODE_67941_length_274_cov_1.532338_g67148_i0 | PRJNA980587 | 67941 | 274 | 1.532338 | 4.19860612 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 59.3 | 7.27e-8 | NR | MFI0434572.1 | 2052176 | g67148 | i0 | 38.9 | 0.985401459854015 | 90 | 49 | 98.5 | 2 | 3 | 272 | 196 | 279 | MFI0434572.1 SET domain-containing protein-lysine N-methyltransferase [Parachlamydiaceae bacterium] | diamond | 270 | 59.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 27942347 | 27942347 | PRJNA980587_P_NODE_82445_length_249_cov_0.875000_g81652_i0 | PRJNA980587 | 82445 | 249 | 0.875 | 2.17875 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 55.8 | 4.55e-7 | NR | MEI8125586.1 | 2052176 | g81652 | i0 | 42.4 | 0.710843373493976 | 59 | 34 | 71.1 | 0 | 4 | 180 | 124 | 182 | MEI8125586.1 MC/SLC25 family protein [Parachlamydiaceae bacterium] | diamond | 177 | 55.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 28731634 | 28731634 | PRJNA980587_P_NODE_80467_length_250_cov_0.870056_g79674_i0 | PRJNA980587 | 80467 | 250 | 0.870056 | 2.17514 | Parachlamydia sp. | 2052048 | Bacteria | Bacteria | 46.6 | 0.00178 | NR | MCE5317683.1 | 2052048 | g79674 | i0 | 42.9 | 0.588 | 49 | 28 | 58.8 | 0 | 242 | 96 | 1357 | 1405 | MCE5317683.1 ankyrin repeat domain-containing protein [Parachlamydia sp.] | diamond | 147 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia sp. | |
| 30626357 | 30626357 | PRJNA980587_P_NODE_72053_length_265_cov_1.364583_g71260_i0 | PRJNA980587 | 72053 | 265 | 1.364583 | 3.61614495 | Chlamydiae bacterium RIFCSPHIGHO2_ | 2081524 | Bacteria | Bacteria | 59.7 | 5.28e-8 | NR | OGN57798.1 | 1797600 | g71260 | i0 | 55.6 | 1.57358490566038 | 45 | 20 | 50.9 | 0 | 240 | 106 | 629 | 673 | OGN57798.1 MAG: hypothetical protein A3D18_05070 [Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_49_29] | diamond | 417 | 59.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_49_29 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;