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contig_metadata

27 rows where bioproject = "PRJNA980587", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 27 ✖

tax_phylum 1

  • Acidobacteriota · 27 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980587 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14983628 14983628 PRJNA980587_P_NODE_52832_length_316_cov_0.864198_g52039_i0 PRJNA980587 52832 316 0.864198 2.73086568 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 436 6.9899999999999996e-118   NTclustered gi|2874254159|emb|OY970389.1| 2283092 g52039 i0 91.385 127 325 19 100 7 1 316 2616571 2616895 MAG: Pyrinomonadaceae bacterium isolate MFD09206.bin.c.1 genome assembly, chromosome: 1 blastn 40132 436 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26773015 26773015 PRJNA980587_P_NODE_19221_length_584_cov_1.326810_g18436_i0 PRJNA980587 19221 584 1.32681 7.7485704 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 155 1.18e-42   NR MDR3737318.1 2052142 g18436 i0 46.9 1.00684931506849 196 93 98.1 5 583 11 118 307 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 588 155 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
26836490 26836490 PRJNA980587_P_NODE_74541_length_259_cov_1.655914_g73748_i0 PRJNA980587 74541 259 1.655914 4.28881726 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.1 0.00692   NR MBN8724370.1 1978231 g73748 i0 40 0.752895752895753 65 35 71.8 2 258 73 480 543 MBN8724370.1 malate synthase A [Acidobacteriota bacterium] diamond 195 45.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26994309 26994309 PRJNA980587_P_NODE_62002_length_288_cov_1.432558_g61209_i0 PRJNA980587 62002 288 1.432558 4.12576704 Terriglobales bacterium 2282142 Bacteria Bacteria 74.7 3.77e-13   NR HZQ71000.1 2282142 g61209 i0 46.9 1 96 49 99 2 3 287 746 840 HZQ71000.1 Ig-like domain repeat protein [Terriglobales bacterium] diamond 288 74.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27474700 27474700 PRJNA980587_P_NODE_33383_length_412_cov_1.834808_g32590_i0 PRJNA980587 33383 412 1.834808 7.55940896 Pseudomonadati 3379134 Bacteria Bacteria 130 1.11e-33   NR MDA0206063.1 1978231 g32590 i0 52 13.1359223300971 125 60 91 0 412 38 165 289 MDA0206063.1 quinone oxidoreductase [Acidobacteriota bacterium] diamond 5412 130 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27626665 27626665 PRJNA980587_P_NODE_85484_length_247_cov_0.885057_g84691_i0 PRJNA980587 85484 247 0.885057 2.18609079 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 73.2 7.15e-13   NR HKR12569.1 2283092 g84691 i0 50.7 0.88663967611336 73 32 88.7 2 224 6 184 252 HKR12569.1 FAD-dependent oxidoreductase [Pyrinomonadaceae bacterium] diamond 219 73.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27784588 27784588 PRJNA980587_P_NODE_91444_length_243_cov_0.905882_g90651_i0 PRJNA980587 91444 243 0.905882 2.20129326 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 137 5.3199999999999995e-37   NR MCD9188357.1 2283092 g90651 i0 87.5 1.96296296296296 80 10 98.8 0 242 3 129 208 MCD9188357.1 c-type cytochrome [Pyrinomonadaceae bacterium] diamond 477 137 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27816154 27816154 PRJNA980587_P_NODE_47804_length_333_cov_2.150000_g47011_i0 PRJNA980587 47804 333 2.15 7.1595 Acidobacteriota bacterium 1978231 Bacteria Bacteria 86.3 4.88e-17   NR MBX3265733.1 1978231 g47011 i0 38.9 2.04504504504505 108 62 94.6 3 316 2 125 231 MBX3265733.1 hypothetical protein [Acidobacteriota bacterium] diamond 681 86.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28011671 28011671 PRJNA980587_P_NODE_77265_length_253_cov_1.622222_g76472_i0 PRJNA980587 77265 253 1.622222 4.10422166 Pseudomonadati 3379134 Bacteria Bacteria 117 5.43e-30   NR HUH63403.1 1964191 g76472 i0 68.7 12.7944664031621 83 26 98.4 0 1 249 144 226 HUH63403.1 aldolase/citrate lyase family protein [Terracidiphilus sp.] diamond 3237 118 0.991525423728814 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
28289390 28289390 PRJNA980587_P_NODE_88246_length_245_cov_0.895349_g87453_i0 PRJNA980587 88246 245 0.895349 2.19360505 Blastocatellia bacterium 2052146 Bacteria Bacteria 60.5 2.24e-9   NR HEU0175738.1 2052146 g87453 i0 52.3 0.538775510204082 44 21 53.9 0 1 132 87 130 HEU0175738.1 hypothetical protein [Blastocatellia bacterium] diamond 132 60.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28516725 28516725 PRJNA980587_P_NODE_20647_length_558_cov_4.214433_g19859_i0 PRJNA980587 20647 558 4.214433 23.51653614 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 130 4.31e-34   NR HMG74784.1 2283092 g19859 i0 58.2 2.62903225806452 98 41 52.7 0 536 243 94 191 HMG74784.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 1467 130 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28769173 28769173 PRJNA980587_P_NODE_33427_length_412_cov_1.353982_g32634_i0 PRJNA980587 33427 412 1.353982 5.57840584 Bacteria 2 Bacteria Bacteria 182 7.749999999999999e-55   NR MBS1831214.1 1978231 g32634 i0 65.9 19.5145631067961 135 42 98.3 1 407 3 54 184 MBS1831214.1 hypothetical protein [Acidobacteriota bacterium] diamond 8040 182 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29053549 29053549 PRJNA980587_P_NODE_74788_length_259_cov_1.236559_g73995_i0 PRJNA980587 74788 259 1.236559 3.20268781 Pseudomonadati 3379134 Bacteria Bacteria 60.8 7.95e-9   NR MBI3951118.1 1978231 g73995 i0 40.9 3.91505791505792 66 39 76.4 0 206 9 73 138 MBI3951118.1 PDZ domain-containing protein [Acidobacteriota bacterium] diamond 1014 60.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29110583 29110583 PRJNA980587_P_NODE_59348_length_295_cov_1.995495_g58555_i0 PRJNA980587 59348 295 1.995495 5.88671025 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 43.9 0.0216   NR MFN0172054.1 2212468 g58555 i0 37.7 0.783050847457627 77 44 75.3 2 287 66 139 214 MFN0172054.1 PEP-CTERM sorting domain-containing protein [Bryobacteraceae bacterium] diamond 231 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
29337628 29337628 PRJNA980587_P_NODE_67409_length_275_cov_1.905941_g66616_i0 PRJNA980587 67409 275 1.905941 5.24133775 Pseudomonadati 3379134 Bacteria Bacteria 80.1 3.26e-15   NR MDQ3131979.1 1978231 g66616 i0 45.2 2.81454545454545 84 46 91.6 0 257 6 34 117 MDQ3131979.1 VWA domain-containing protein [Acidobacteriota bacterium] diamond 774 80.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29457470 29457470 PRJNA980587_P_NODE_94910_length_241_cov_0.916667_g94117_i0 PRJNA980587 94910 241 0.916667 2.20916747 Acidobacteriota bacterium 1978231 Bacteria Bacteria 165 3.64e-45   NR MEW6361357.1 1978231 g94117 i0 100 0.995850622406639 80 0 99.6 0 1 240 146 225 MEW6361357.1 sigma 54-interacting transcriptional regulator [Acidobacteriota bacterium] diamond 240 165 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29684581 29684581 PRJNA980587_P_NODE_85270_length_247_cov_0.885057_g84477_i0 PRJNA980587 85270 247 0.885057 2.18609079 Pseudomonadati 3379134 Bacteria Bacteria 84.3 2.06e-17   NR HVF89017.1 2052146 g84477 i0 59.2 8.65991902834008 71 24 80.2 1 247 50 208 278 HVF89017.1 amidohydrolase family protein [Blastocatellia bacterium] diamond 2139 84.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
29868293 29868293 PRJNA980587_P_NODE_24631_length_500_cov_1.615925_g23840_i0 PRJNA980587 24631 500 1.615925 8.079625 Acidobacteriota bacterium 1978231 Bacteria Bacteria 52.4 2.16e-4   NR MEJ2147214.1 1978231 g23840 i0 45.9 1.008 61 27 33 2 497 333 131 191 MEJ2147214.1 hypothetical protein [Acidobacteriota bacterium] diamond 504 52.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30311081 30311081 PRJNA980587_P_NODE_31852_length_424_cov_3.635328_g31059_i0 PRJNA980587 31852 424 3.635328 15.41379072 Acidobacteriota bacterium 1978231 Bacteria Bacteria 166 1.84e-49   NR MBI2214083.1 1978231 g31059 i0 74.8 2.17924528301887 103 26 72.9 0 3 311 63 165 MBI2214083.1 peptidylprolyl isomerase [Acidobacteriota bacterium] diamond 924 166 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30342692 30342692 PRJNA980587_P_NODE_61652_length_289_cov_1.398148_g60859_i0 PRJNA980587 61652 289 1.398148 4.04064772 Acidobacteriota bacterium 1978231 Bacteria Bacteria 71.2 6.13e-12   NR MEM7048688.1 1978231 g60859 i0 37.9 1.06920415224913 103 56 98.6 2 2 286 383 485 MEM7048688.1 SDR family oxidoreductase [Acidobacteriota bacterium] diamond 309 71.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30689595 30689595 PRJNA980587_P_NODE_78773_length_251_cov_0.865169_g77980_i0 PRJNA980587 78773 251 0.865169 2.17157419 Blastocatellia bacterium 2052146 Bacteria Bacteria 53.9 1.95e-6   NR HVF92138.1 2052146 g77980 i0 54.8 0.50199203187251 42 19 50.2 0 125 250 17 58 HVF92138.1 M23 family metallopeptidase [Blastocatellia bacterium] diamond 126 53.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30879227 30879227 PRJNA980587_P_NODE_51234_length_321_cov_1.241935_g50441_i0 PRJNA980587 51234 321 1.241935 3.98661135 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 55.8 1.97e-6   NR HEV7902221.1 2283092 g50441 i0 35.8 0.757009345794392 81 50 75.7 2 2 244 164 242 HEV7902221.1 S1/P1 nuclease [Pyrinomonadaceae bacterium] diamond 243 55.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31581025 31581025 PRJNA980587_P_NODE_79236_length_251_cov_0.865169_g78443_i0 PRJNA980587 79236 251 0.865169 2.17157419 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 84 3.48e-17   NR MCB1050173.1 1978231 g78443 i0 51.9 2.98804780876494 81 38 96.8 1 1 243 191 270 MCB1050173.1 S-methyl-5'-thioadenosine phosphorylase [Acidobacteriota bacterium] diamond 750 84 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31992084 31992084 PRJNA980587_P_NODE_79638_length_250_cov_1.740113_g78845_i0 PRJNA980587 79638 250 1.740113 4.3502825 Bacteria 2 Bacteria Bacteria 84.7 2.72e-17   NR MCG6928898.1 1978231 g78845 i0 49.3 4.728 75 37 90 1 225 1 6 79 MCG6928898.1 Gfo/Idh/MocA family oxidoreductase [Acidobacteriota bacterium] diamond 1182 84.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32207555 32207555 PRJNA980587_P_NODE_11878_length_792_cov_2.020862_g11160_i0 PRJNA980587 11878 792 2.020862 16.00522704 Holophagaceae bacterium 2052165 Bacteria Bacteria 160 5.79e-45   NR NTW86739.1 2052165 g11160 i0 50 2.48484848484848 152 74 57.2 2 308 760 36 186 NTW86739.1 peroxiredoxin [Holophagaceae bacterium] diamond 1968 160 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae   Holophagaceae bacterium
32207572 32207572 PRJNA980587_P_NODE_94438_length_241_cov_0.916667_g93645_i0 PRJNA980587 94438 241 0.916667 2.20916747 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 100 1.01e-22   NR HVT94521.1 2212468 g93645 i0 65.3 0.896265560165975 72 25 89.6 0 21 236 129 200 HVT94521.1 type VI secretion system baseplate subunit TssK [Bryobacteraceae bacterium] diamond 216 100 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32681280 32681280 PRJNA980587_P_NODE_68060_length_274_cov_1.283582_g67267_i0 PRJNA980587 68060 274 1.283582 3.51701468 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 95.1 6.9e-22   NR MFN2454516.1 2283092 g67267 i0 61.4 0.766423357664234 70 27 76.6 0 6 215 139 208 MFN2454516.1 carbonate dehydratase [Pyrinomonadaceae bacterium] diamond 210 95.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;