RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA980587" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA980587 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29583762 29583762 PRJNA980587_P_NODE_64010_length_283_cov_1.947619_g63217_i0 PRJNA980587 64010 283 1.947619 5.51176177 Sulfuracidifex tepidarius 1294262 Archaea Archaea 79 9.93e-15   NR WP_054844872.1 1294262 g63217 i0 46.9 2.53356890459364 81 42 84.8 1 241 2 342 422 WP_054844872.1 translation elongation factor EF-1 subunit alpha [Sulfuracidifex tepidarius] diamond 717 79 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfuracidifex Sulfuracidifex tepidarius
32492472 32492472 PRJNA980587_P_NODE_49019_length_329_cov_1.203125_g48226_i0 PRJNA980587 49019 329 1.203125 3.95828125 Nitrososphaerales archaeon 2268197 Archaea Archaea 51.2 1.02e-4   NR MFQ6134396.1 2268197 g48226 i0 26.9 0.848024316109423 93 68 84.8 0 291 13 118 210 MFQ6134396.1 leucyl aminopeptidase [Nitrososphaerales archaeon] diamond 279 51.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;